Evidence map›Paper›PMID 1630454›Full record

ArticleMolecular and cellular biology1992

Characterization of cis-acting elements regulating transcription from the promoter of a constitutively active rice actin gene.

Y Wang, W Zhang, J Cao, D McElroy, R Wu

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 35 citations in OpenAlex.

  1. Promoters, KeyInternational journal of molecular sciences · 2024
    Review
  2. Review
  3. Design of gene constructs for transgenic maize.Methods in molecular biology (Clifton, N.J.) · 2009
    Review
  4. Identification of defense-related genes in rice responding to challenge by Rhizoctonia solani.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2008
    Article
  5. Article
  6. Article
  7. Cre/lox-mediated marker gene excision in transgenic maize (Zea mays L.) plants.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2003
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Y WangSection of Biochemistry, Molecular and Cell Biology, Cornell University, Ithaca, New York 14853.
W Zhang
J Cao
D McElroy
R Wu
Cornell University · US

Funding

DNA SEQUENCE ANALYSIS OF EUCARYOTIC CYTOCHROME C GENESR01GM029179 · NIGMS · CORNELL UNIVERSITY ITHACA · PI WU, RAY J. · 1985 to 1990
–
NIGMS NIH HHS GM29179
6 · The paper itself

Abstract

The promoter of the constitutively expressed rice (Oryza sativa) actin 1 gene (Act1) is highly active in transformed rice plants (W. Zhang, D. McElroy, and R. Wu, Plant Cell 3:1150-1160, 1991). A region 834 bp upstream of the Act1 transcription initiation site contains all the regulatory elements necessary for maximal gene expression in transformed rice protoplasts (D. McElroy, W. Zhang, J. Cao, and R. Wu, Plant Cell 2:163-171, 1990). We have constructed a series of Act1 promoter deletions fused to a bacterial beta-glucuronidase reporter sequence (Gus). Transient expression assays in transformed rice protoplasts, as well as transformed maize cells and tissues, identified two distinct cis-acting regulatory elements in the Act1 promoter. A 38-bp poly(dA-dT) region was found to be a positive regulator of Act1 promoter activity. Deletion of the poly(dA-dT) element lowered Gus expression by at least threefold compared with expression produced by the full-length Act1 promoter. By gel retardation and footprinting, we identified a ubiquitous rice protein which specifically recognizes this poly(dA-dT) element in the constitutively active Act1 promoter. A CCCAA pentamer repeat-containing region was found to be a negative regulator of the Act1 promoter in transformed rice protoplasts. Transient expression assays in different maize cells and tissues with use of the Act1 deletion constructs suggested that the CCCAA pentamer repeat region functions in a complex tissue-specific manner. A CCCAA-binding protein was detected only in root extracts.

Indexed as

Gene Expression RegulationPromoter Regions, GeneticTranscription, GeneticActinsBase SequenceBinding SitesCarrier ProteinsChromosome DeletionDNAGlucuronidaseMolecular Sequence DataOryzaPlant ProteinsPoly dA-dTProtoplastsRegulatory Sequences, Nucleic AcidActinsCarrier ProteinsDNAGlucuronidasePlant ProteinsPoly dA-dT

Identifiers

PMID1630454
PMCPMC364588
OpenAlexW1841884863

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.