Evidence map›Paper›PMID 16300676›Full record

ArticleBMC genomics2005

Efficient gene-driven germ-line point mutagenesis of C57BL/6J mice.

Edward J Michaud, Cymbeline T Culiat, Mitchell L Klebig, Paul E Barker, K T Cain, Debra J Carpenter, Lori L Easter, Carmen M Foster, Alysyn W Gardner, Z Y Guo and 11 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  3. Review
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  8. Article
  9. Review
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  11. Article
  12. Use of an exon-trapping vector for the evaluation of splice-site mutations.Mammalian genome : official journal of the International Mammalian Genome Society · 2007
    Article
  13. Comparative genetic analysis: the utility of mouse genetic systems for studying human monogenic disease.Mammalian genome : official journal of the International Mammalian Genome Society · 2007
    Review
  14. Article
  15. Article
  16. Variations of eye size parameters among different strains of mice.Mammalian genome : official journal of the International Mammalian Genome Society · 2006
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 3 institutions in 1 country.

Edward J MichaudLife Sciences Division, Oak Ridge National Laboratory, P,O, Box 2008, Oak Ridge, TN 37831, USA. michaudejiii@ornl.gov
Cymbeline T Culiat
Mitchell L Klebig
Paul E Barker
K T Cain
Debra J Carpenter
Lori L Easter
Carmen M Foster
Alysyn W Gardner
Z Y Guo
Kay J Houser
Lori A Hughes
Marilyn K Kerley
Zhaowei Liu
Robert E Olszewski
Irina Pinn
Ginger D Shaw
Sarah G Shinpock
Ann M Wymore
Eugene M Rinchik
Dabney K Johnson
Oak Ridge National Laboratory · USSpectrum Research (United States) · USUniversity of Tennessee at Knoxville · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundAnalysis of an allelic series of point mutations in a gene, generated by N-ethyl-N-nitrosourea (ENU) mutagenesis, is a valuable method for discovering the full scope of its biological function. Here we present an efficient gene-driven approach for identifying ENU-induced point mutations in any gene in C57BL/6J mice. The advantage of such an approach is that it allows one to select any gene of interest in the mouse genome and to go directly from DNA sequence to mutant mice.

resultsWe produced the Cryopreserved Mutant Mouse Bank (CMMB), which is an archive of DNA, cDNA, tissues, and sperm from 4,000 G1 male offspring of ENU-treated C57BL/6J males mated to untreated C57BL/6J females. Each mouse in the CMMB carries a large number of random heterozygous point mutations throughout the genome. High-throughput Temperature Gradient Capillary Electrophoresis (TGCE) was employed to perform a 32-Mbp sequence-driven screen for mutations in 38 PCR amplicons from 11 genes in DNA and/or cDNA from the CMMB mice. DNA sequence analysis of heteroduplex-forming amplicons identified by TGCE revealed 22 mutations in 10 genes for an overall mutation frequency of 1 in 1.45 Mbp. All 22 mutations are single base pair substitutions, and nine of them (41%) result in nonconservative amino acid substitutions. Intracytoplasmic sperm injection (ICSI) of cryopreserved spermatozoa into B6D2F1 or C57BL/6J ova was used to recover mutant mice for nine of the mutations to date.

conclusionsThe inbred C57BL/6J CMMB, together with TGCE mutation screening and ICSI for the recovery of mutant mice, represents a valuable gene-driven approach for the functional annotation of the mammalian genome and for the generation of mouse models of human genetic diseases. The ability of ENU to induce mutations that cause various types of changes in proteins will provide additional insights into the functions of mammalian proteins that may not be detectable by knockout mutations.

Indexed as

Genetic TechniquesMutagenesisAnimalsCrosses, GeneticCryopreservationDatabases, GeneticDNADNA, ComplementaryDNA Mutational AnalysisEthylnitrosoureaFemaleGenotypeGerm-Line MutationHomozygoteMaleMiceDNADNA, ComplementaryEthylnitrosoureaMutagens

Identifiers

PMID16300676
PMCPMC1325271
OpenAlexW1571263971

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.