Evidence map›Paper›PMID 16288923›Full record

ArticleJournal of molecular biology2005

Correlation of gene and protein structures in the FXYD family proteins.

Carla M Franzin, Jinghua Yu, Khang Thai, Jungyuen Choi, Francesca M Marassi

Abstract read
In one paragraph

Article in Journal of molecular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  9. Structural similarity of a membrane protein in micelles and membranes.Journal of the American Chemical Society · 2007
    Article
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  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Carla M FranzinThe Burnham Institute, 10901 North Torrey Pines Road, La Jolla, CA 92037, USA.
Jinghua Yu
Khang Thai
Jungyuen Choi
Francesca M Marassi
Sanford Burnham Prebys Medical Discovery Institute · US

Funding

Tumor Microenvironment and Cancer ImmunologyP30CA030199 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Michael Jackson · 1985 to 2026
$107.2M
Structure of Mammary Tumor Mat8 and the FXYD proteinsR01CA082864 · NCI · BURNHAM INSTITUTE FOR MEDICAL RESEARCH · PI MARASSI, FRANCESCA M · 2001 to 2005
$1.5M
NCI NIH HHS P30 CA030199NCI NIH HHS R01 CA082864
6 · The paper itself

Abstract

The FXYD family proteins are auxiliary subunits of the Na,K-ATPase, expressed primarily in tissues that specialize in fluid or solute transport, or that are electrically excitable. These proteins range in size from about 60 to 160 amino acid residues, and share a core homology of 35 amino acid residues in and around a single transmembrane segment. Despite their relatively small sizes, they are all encoded by genes with six to nine small exons. We show that the helical secondary structures of three FXYD family members, FXYD1, FXYD3, and FXYD4, determined in micelles by NMR spectroscopy, reflect the structures of their corresponding genes. The coincidence of helical regions, and connecting segments, with the positions of intron-exon junctions in the genes, support the hypothesis that the FXYD proteins may have been assembled from discrete structural modules through exon shuffling.

Indexed as

AnimalsExonsGene ComponentsGene RearrangementHumansIntracellular Signaling Peptides and ProteinsMembrane ProteinsMiceMicellesNeoplasm ProteinsNuclear Magnetic Resonance, BiomolecularPhosphoproteinsPotassium ChannelsProtein Structure, SecondaryRatsSodium Dodecyl SulfateFXYD3 protein, humanFxyd4 protein, ratIntracellular Signaling Peptides and ProteinsMembrane ProteinsMicellesNeoplasm ProteinsphospholemmanPhosphoproteinsPotassium ChannelsSodium Dodecyl SulfateSodium-Potassium-Exchanging ATPase

Identifiers

PMID16288923
PMCPMC2907130
OpenAlexW2027873410

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.