Evidence map›Paper›PMID 16287846›Full record

ArticleMolecular and cellular biology2005

Histone-modifying complexes regulate gene expression pertinent to the differentiation of the protozoan parasite Toxoplasma gondii.

Nehmé Saksouk, Micah M Bhatti, Sylvie Kieffer, Aaron T Smith, Karine Musset, Jérôme Garin, William J Sullivan, Marie-France Cesbron-Delauw, Mohamed-Ali Hakimi

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.

0numbers the graph read from it
0cells of the map it votes in
106citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

106 citing papers in PubMed, 195 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Article
  6. eLife · 2024
    Article
  7. bioRxiv : the preprint server for biology · 2024
    Article
  8. Review
  9. Review
  10. Article
  11. Proteomics Applications inPathogens (Basel, Switzerland) · 2023
    Review
  12. Article
  13. Article
  14. TgKDAC4: A Unique Deacetylase ofMicroorganisms · 2023
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article

46 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Nehmé SaksoukATIP-UMR5163-CNRS, Jean-Roget Institute, Domaine de la Merci, 38700 Grenoble, France.
Micah M Bhatti
Sylvie Kieffer
Aaron T Smith
Karine Musset
Jérôme Garin
William J Sullivan
Marie-France Cesbron-Delauw
Mohamed-Ali Hakimi
Indiana University School of MedicineCEA Grenoble · FRInserm · FR

Funding

Production of New Adenovector Constructs with Fiber-Shaft ModificationsZ01AI005093 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI WALLACE, KIMBERLY · 2007 to 2008
$2.7M
GENE DISCOVERY IN TOXOPLASMA GONDIIR01AI045806 · NIAID · WASHINGTON UNIVERSITY · PI SIBLEY, L DAVID · 2000 to 2003
$1.6M
GCN5-mediated transcription in AIDS pathogen ToxoplasmaR01GM065051 · NIGMS · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI SULLIVAN, WILLIAM J · 2003 to 2007
$1.2M
Intramural NIH HHS Z01 AI005093NIAID NIH HHS 1R01AI045806-01A1NIAID NIH HHS AI05093NIAID NIH HHS R01 AI045806NIGMS NIH HHS R01 GM065051Wellcome Trust
6 · The paper itself

Abstract

Pathogenic apicomplexan parasites like Toxoplasma and Plasmodium (malaria) have complex life cycles consisting of multiple stages. The ability to differentiate from one stage to another requires dramatic transcriptional changes, yet there is a paucity of transcription factors in these protozoa. In contrast, we show here that Toxoplasma possesses extensive chromatin remodeling machinery that modulates gene expression relevant to differentiation. We find that, as in other eukaryotes, histone acetylation and arginine methylation are marks of gene activation in Toxoplasma. We have identified mediators of these histone modifications, as well as a histone deacetylase (HDAC), and correlate their presence at target promoters in a stage-specific manner. We purified the first HDAC complex from apicomplexans, which contains novel components in addition to others previously reported in eukaryotes. A Toxoplasma orthologue of the arginine methyltransferase CARM1 appears to work in concert with the acetylase TgGCN5, which exhibits an unusual bias for H3 [K18] in vitro. Inhibition of TgCARM1 induces differentiation, showing that the parasite life cycle can be manipulated by interfering with epigenetic machinery. This may lead to new approaches for therapy against protozoal diseases and highlights Toxoplasma as an informative model to study the evolution of epigenetics in eukaryotic cells.

Indexed as

Gene Expression RegulationAcetylationAnimalsArginineCystsHistone AcetyltransferasesHistone DeacetylasesHistonesMethylationp300-CBP-Associated FactorPromoter Regions, GeneticProtein-Arginine N-MethyltransferasesProtein BindingProtozoan ProteinsRepressor ProteinsToxoplasmaArgininecoactivator-associated arginine methyltransferase 1GCN5 protein, Toxoplasma gondiiHistone AcetyltransferasesHistone DeacetylasesHistonesp300-CBP-Associated FactorProtein-Arginine N-MethyltransferasesProtozoan ProteinsRepressor Proteins

Identifiers

PMID16287846
PMCPMC1291236
OpenAlexW2119169511

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.