Evidence map›Paper›PMID 16287844›Full record

ArticleMolecular and cellular biology2005

Loss of SOD1 and LYS7 sensitizes Saccharomyces cerevisiae to hydroxyurea and DNA damage agents and downregulates MEC1 pathway effectors.

Carole D Carter, Lauren E Kitchen, Wei-Chun Au, Christopher M Babic, Munira A Basrai

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Fingolimod Potentiates the Antifungal Activity of Amphotericin B.Frontiers in cellular and infection microbiology · 2021
    Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. The Expanding Landscape of Moonlighting Proteins in Yeasts.Microbiology and molecular biology reviews : MMBR · 2016
    Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. The yeast copper response is regulated by DNA damage.Molecular and cellular biology · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Carole D CarterGenetics Branch, Center for Cancer Research, National Cancer Institute, National Institutes of Health, National Naval Medical Center, Building 8, Room 5101, 8901 Wisconsin Ave., Bethesda, MD 20889-5105, USA.
Lauren E Kitchen
Wei-Chun Au
Christopher M Babic
Munira A Basrai
Walter Reed National Military Medical Center · USCenter for Cancer Research · USNational Cancer Institute · USNational Institutes of Health · US

Funding

Molecular Determinants of Faithful Chromosome TransmissiZ01SC010360 · SC · CLINICAL SCIENCES · PI BASRAI, MUNIRA · 2000 to 2006
–
Intramural NIH HHS
6 · The paper itself

Abstract

Aerobic metabolism produces reactive oxygen species, including superoxide anions, which cause DNA damage unless removed by scavengers such as superoxide dismutases. We show that loss of the Cu,Zn-dependent superoxide dismutase, SOD1, or its copper chaperone, LYS7, confers oxygen-dependent sensitivity to replication arrest and DNA damage in Saccharomyces cerevisiae. We also find that sod1Delta strains, and to a lesser extent lys7Delta strains, when arrested with hydroxyurea (HU) show reduced induction of the MEC1 pathway effector Rnr3p and of Hug1p. The HU sensitivity of sod1Delta and lys7Delta strains is suppressed by overexpression of TKL1, a transketolase that generates NADPH, which balances redox in the cell and is required for ribonucleotide reductase activity. Our results suggest that the MEC1 pathway in sod1Delta mutant strains is sensitive to the altered cellular redox state due to increased superoxide anions and establish a new relationship between SOD1, LYS7, and the MEC1-mediated checkpoint response to replication arrest and DNA damage in S. cerevisiae.

Indexed as

Cell Cycle ProteinsCheckpoint Kinase 2Culture MediaDNA-Binding ProteinsDNA DamageDNA, FungalDNA ReplicationDown-RegulationGene DeletionGene Expression Regulation, FungalHydroxyureaIntracellular Signaling Peptides and ProteinsMolecular ChaperonesNuclear Receptor Subfamily 4, Group A, Member 2OxygenPhosphorylationCell Cycle ProteinsCheckpoint Kinase 2Culture MediaDNA-Binding ProteinsDNA, FungalHUG1 protein, S cerevisiaeHydroxyureaIntracellular Signaling Peptides and ProteinsLYS7 protein, S cerevisiaeMEC1 protein, S cerevisiaeMolecular ChaperonesNuclear Receptor Subfamily 4, Group A, Member 2OxygenProtein Serine-Threonine KinasesRAD53 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSML1 protein, S cerevisiaeSuperoxide DismutaseSuperoxide Dismutase-1TKL1 protein, S cerevisiaeTranscription FactorsTransketolase

Identifiers

PMID16287844
PMCPMC1291217
OpenAlexW2103952668

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.