Evidence map›Paper›PMID 16284798›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2005

Implementation of the modified-SHIRPA protocol for screening of dominant phenotypes in a large-scale ENU mutagenesis program.

Hiroshi Masuya, Maki Inoue, Yumiko Wada, Aya Shimizu, Junko Nagano, Akiko Kawai, Ayako Inoue, Tomoko Kagami, Taeko Hirayama, Ayako Yamaga and 8 more

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Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

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  12. A comprehensive phenotypic characterization of a whole-body Wdr45 knock-out mouse.Mammalian genome : official journal of the International Mammalian Genome Society · 2021
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  18. Loss ofDisease models & mechanisms · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Hiroshi MasuyaFunctional Genomics Research Group, RIKEN Genomic Sciences Center, 3-1-1 Kouyadai, Tsukubai, Ibaraki, Japan.
Maki Inoue
Yumiko Wada
Aya Shimizu
Junko Nagano
Akiko Kawai
Ayako Inoue
Tomoko Kagami
Taeko Hirayama
Ayako Yamaga
Hideki Kaneda
Kimio Kobayashi
Osamu Minowa
Ikuo Miura
Yoichi Gondo
Tetsuo Noda
Shigeharu Wakana
Toshihiko Shiroishi

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SHIRPA is a three-stage protocol for the comprehensive assessment of primarily mouse behavior. The first stage consists of high-throughput phenotyping of 33 behavioral observations and 7 metabolic or disease observations. We modified this part of the protocol by integrating new morphologic observations into the initial phenotype assay of behavior and dysmorphology. Behavioral observations assessed by this protocol, now referred to as the "modified-SHIRPA," are compatible with the original "SHIRPA" protocol. Using modified-SHIRPA, we screened dominant phenotypes of more than 10,000 G(1) progeny generated by crossing DBA/2J females with ENU-treated C57BL/6J males. To date, we have obtained 136 hereditary-confirmed mutants that exhibit behavioral and morphologic defects. Some independent mutant lines exhibited similar phenotypes, suggesting that they may represent alleles of the same gene or mutations in the same genetic pathway. They could hold great potential for the unraveling of the molecular mechanisms of certain phenotypes.

Indexed as

Behavior, AnimalMutagenesisAnimalsEthylnitrosoureaFemaleHindlimbMaleMiceMice, Inbred C57BLMice, Inbred DBAMice, Mutant StrainsMutagensPhenotypeSkin PigmentationEthylnitrosoureaMutagens

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.