Evidence map›Paper›PMID 16284268›Full record

ArticleBiophysical journal2006

Aqueous diffusion pathways as a part of the ventricular cell ultrastructure.

A S Parfenov, V Salnikov, W J Lederer, V Lukyánenko

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 45 citations in OpenAlex.

  1. Article
  2. Article
  3. Solute movement in the t-tubule system of rabbit and mouse cardiomyocytes.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Action potential propagation in transverse-axial tubular system is impaired in heart failure.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  12. Article
  13. Article
  14. Article
  15. Mitochondria in cardiomyocyte Ca2+ signaling.The international journal of biochemistry & cell biology · 2009
    Review
  16. Distribution of ryanodine receptors in rat ventricular myocytes.Journal of muscle research and cell motility · 2009
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

A S ParfenovMedical Biotechnology Center, University of Maryland Biotechnology Institute, Baltimore, Maryland, USA.
V Salnikov
W J Lederer
V Lukyánenko
University of Maryland, Baltimore · USBiotechnology Institute · US

Funding

Molecular Basis of Sudden Cardiac DeathP01HL067849 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MARKS, ANDREW ROBERT · 2001 to 2011
$15.0M
Subcellular organization and Ca+2 signaling in heart failureP01HL070709 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI ROGERS, TERRY B. · 2002 to 2006
$7.1M
SODIUM PUMP, INTRACELLULAR NA AND TENSION IN HEARTR01HL025675 · NHLBI · UNIVERSITY OF MD BIOTECHNOLOGY INSTITUTE · PI LEDERER, WILLIAM JONATHAN · 1985 to 2004
$1.9M
CELLULAR ORIGINS OF CARDIAC ARRHYTHMIASR01HL036974 · NHLBI · UNIVERSITY OF MD BIOTECHNOLOGY INSTITUTE · PI LEDERER, WILLIAM JONATHAN · 1987 to 2007
$1.5M
CALCIUM SPARKS IN HEART MUSCLER37HL036974 · NHLBI · UNIVERSITY OF MD BIOTECHNOLOGY INSTITUTE · PI LEDERER, WILLIAM JONATHAN · 1994 to 2003
$1.2M
NHLBI NIH HHS HL25675NHLBI NIH HHS HL36974NHLBI NIH HHS HL67849NHLBI NIH HHS HL70709NHLBI NIH HHS P01 HL067849NHLBI NIH HHS P01 HL070709NHLBI NIH HHS R01 HL025675NHLBI NIH HHS R01 HL036974NHLBI NIH HHS R37 HL036974
6 · The paper itself

Abstract

The physical organization of the ventricular myocyte includes barriers for the movement of objects of varying dimensions ranging from ions to solid particles. There are two kinds of diffusion in the cell: lateral (in membranes) and aqueous. Here we examine the size constraints of aqueous diffusion pathways and discuss their impact on cellular physiology. Calibrated gold nanoparticles were used to probe the accessibility of the entire transverse-axial tubular system (TATS), the sarcoplasm, and intracellular structures. The TATS tubules, although up to 300 nm in diameter, permitted only particles </=11 nm to enter. When calibrated nanoparticles were added to permeabilized ventricular cells, particles </=11 nm were found in the sarcoplasm. The distribution of nanoparticles in the cells allowed us to conclude that 1), the TATS and the sarcoplasm are accessible only for particles </=11 nm; 2), the gaps between T-tubules and junctional sarcoplasmic reticulum (jSR), jSR and mitochondria, and intermitochondrial contacts are inaccessible for particles with physical size >3 nm; 3), the mitochondrial voltage-dependent anion channel and the nuclear pore complex in ventricular cells could not be penetrated by particles >/=6 nm; and 4), there is a difference in size clearance between transversal and longitudinal sarcoplasmic diffusional pathways.

Indexed as

AnimalsBiophysicsCalciumCalibrationCationsCells, CulturedCytochalasin DCytoskeletonDiffusionHeart VentriclesLightMaleMicroscopy, ConfocalMicroscopy, ElectronMitochondriaNanostructuresCalciumCationsCytochalasin D

Identifiers

PMID16284268
PMCPMC1367097
OpenAlexW2038501159

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.