Evidence map›Paper›PMID 16283715›Full record

ArticleBiomacromolecules

Oligonucleotide structure influences the interactions between cationic polymers and oligonucleotides.

Sumati Sundaram, Sandra Viriyayuthakorn, Charles M Roth

Open access · greenAbstract read
In one paragraph

Article in Biomacromolecules. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sumati SundaramDepartment of Chemical & Biochemical Engineering, Rutgers University, 98 Brett Road, Piscataway, New Jersey 08854, USA.
Sandra Viriyayuthakorn
Charles M Roth
Rutgers, The State University of New Jersey · US

Funding

Efficient and Selective Delivery of OligonucleotidesR01GM065913 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI ROTH, CHARLES M. · 2002 to 2006
$1.1M
NIGMS NIH HHS R01 GM065913NIGMS NIH HHS R01 GM65913
6 · The paper itself

Abstract

We examined the effect of oligodeoxynucleotide (ODN) structure on the interactions between cationic polymers and ODNs. Unstructured and hairpin structured ODNs were used to form complexes with the model cationic polymer, poly-L-lysine (pLL), and the characteristics of these polymer-ODN interactions were subsequently examined. We found that hairpin structured ODNs formed complexes with pLL at slightly lower pLL:ODN charge ratios as compared to unstructured ODNs and that, at high charge ratios, greater fractions of the hairpin ODNs were complexed, as measured by dye exclusion. The dissociation of pLL-ODN interactions was tested further by challenge with heparin, which induced complex disruption. Both the kinetics and heparin dose response of ODN release were determined. The absolute amount and the kinetic rate of ODN release from the complexes of pLL and unstructured ODN were greater, as compared to hairpin ODNs. Our results therefore highlight the role of ODN structure on the association-dissociation behavior of polymer-ODN complexes. These findings have implications for the selection of ODN sequences and design of polymeric carriers used for cellular delivery of ODNs.

Indexed as

Drug CarriersBiocompatible MaterialsCationsDNADose-Response Relationship, DrugDrug Delivery SystemsGene Transfer TechniquesHeparinKineticsMacromolecular SubstancesModels, StatisticalNucleic Acid ConformationOligonucleotidesOligonucleotides, AntisensePolymersProtein BindingBiocompatible MaterialsCationsDNADrug CarriersHeparinMacromolecular SubstancesOligonucleotidesOligonucleotides, AntisensePolymers

Identifiers

PMID16283715
PMCPMC2519154
OpenAlexW2033778640

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.