Evidence map›Paper›PMID 16283313›Full record

ArticleCurrent genetics2005

Diversity of the exoproteome of Fusarium graminearum grown on plant cell wall.

Vincent Phalip, François Delalande, Christine Carapito, Florence Goubet, Didier Hatsch, Emmanuelle Leize-Wagner, Paul Dupree, Alain Van Dorsselaer, Jean-Marc Jeltsch

Abstract read
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Article in Current genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 143 citations in OpenAlex.

  1. Article
  2. Proteomic Profiling of Plant and Pathogen Interaction on the Leaf Epidermis.International journal of molecular sciences · 2022
    Article
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  4. Novel Secreted Peptides FromFrontiers in microbiology · 2022
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  5. WheatFoods (Basel, Switzerland) · 2021
    Article
  6. Article
  7. Review
  8. Article
  9. Article
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  14. Article
  15. Characterization of theFrontiers in microbiology · 2016
    Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Vincent PhalipUMR 7175-Laboratoire de Phytopathologie, Université Louis Pasteur, Illkirch, France. vincent.phalip@esbs.u-strasbg.fr
François Delalande
Christine Carapito
Florence Goubet
Didier Hatsch
Emmanuelle Leize-Wagner
Paul Dupree
Alain Van Dorsselaer
Jean-Marc Jeltsch
Physique des interactions ioniques et moléculaires · FRLaboratoire de Biophotonique et Pharmacologie · FRUniversity of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council D19624
6 · The paper itself

Abstract

The exoproteome of the fungus Fusarium graminearum grown on glucose and on hop (Humulus lupulus, L.) cell wall has been investigated. The culture medium was found to contain a higher quantity of proteins and the proteins are more diverse when the fungus is grown on cell wall. Using both 1D and 2D electrophoresis followed by mass spectrometry analysis and protein identification based on similarity searches, 84 unique proteins were identified in the cell wall-grown fungal exoproteome. Many are putatively implicated in carbohydrate metabolism, mainly in cell wall polysaccharide degradation. The predicted carbohydrate-active enzymes fell into 24 different enzymes classes, and up to eight different proteins within a same class are secreted. This indicates that fungal metabolism becomes oriented towards synthesis and secretion of a whole arsenal of enzymes able to digest almost the complete plant cell wall. Cellobiohydrolase is one of the only four proteins found both after growth on glucose and on plant cell wall and we propose that this enzyme could act as a sensor of the extracellular environment. Extensive knowledge of this very diverse F. graminearum exoproteome is an important step towards the full understanding of Fusarium/plants interactions.

Indexed as

Cellulose 1,4-beta-CellobiosidaseCell WallFusariumGene Expression Regulation, PlantGlucosePlant ProteinsPlantsPolysaccharidesCellulose 1,4-beta-CellobiosidaseGlucosePlant ProteinsPolysaccharides

Identifiers

PMID16283313
OpenAlexW2022217999

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.