Evidence map›Paper›PMID 16275922›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Cyclin H binding to the RARalpha activation function (AF)-2 domain directs phosphorylation of the AF-1 domain by cyclin-dependent kinase 7.

Gaétan Bour, Emilie Gaillard, Nathalie Bruck, Sébastien Lalevée, Jean-Luc Plassat, Didier Busso, Jean-Pierre Samama, Cécile Rochette-Egly

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Gaétan BourDépartement de Biologie Cellulaire et de Transduction du Signal, Centre National de la Recherche Scientifique/Institut National de la Santé et de la Recherche Médicale/Université Louis Pasteur, UMR 7104, Illkirch, France.
Emilie Gaillard
Nathalie Bruck
Sébastien Lalevée
Jean-Luc Plassat
Didier Busso
Jean-Pierre Samama
Cécile Rochette-Egly
Inserm · FRInstitut de génétique et de biologie moléculaire et cellulaire · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcriptional activity of nuclear retinoic acid receptors (RARs), which act as RAR/retinoid X receptor (RXR) heterodimers, depends on two activation functions, AF-1 and AF-2, which are targets for phosphorylations and synergize for the activation of retinoic acid target genes. The N-terminal AF-1 domain of RARalpha is phosphorylated at S77 by the cyclin-dependent kinase (cdk)-activating kinase (CAK) subcomplex (cdk7/cyclin H/MAT1) of the general transcription factor TFIIH. Here, we show that phosphorylation of S77 governing the transcriptional activity of RARalpha depends on cyclin H binding at a RARalpha region that encompasses loop 8-9 and the N-terminal tip of helix 9 of the AF-2 domain. We propose a model in which the structural constraints of this region control the architecture of the RAR/RXR/TFIIH complex and therefore the efficiency of RARalpha phosphorylation by cdk7. To our knowledge, this study provides the first example of a cooperation between the AF-2 and AF-1 domains of RARs through a kinase complex.

Indexed as

AnimalsBase SequenceCell LineCyclin-Dependent Kinase-Activating KinaseCyclin-Dependent KinasesCyclin HCyclinsDNA PrimersModels, MolecularPhosphorylationProtein BindingReceptors, Retinoic AcidRetinoic Acid Receptor alphaReverse Transcriptase Polymerase Chain ReactionRNA, Small InterferingSpodopteraCyclin-Dependent Kinase-Activating KinaseCyclin-Dependent KinasesCyclin HCyclinsDNA PrimersReceptors, Retinoic AcidRetinoic Acid Receptor alphaRNA, Small Interfering

Identifiers

PMID16275922
PMCPMC1283805
OpenAlexW2105412223

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.