ArticleMolecular genetics and genomics : MGG2005
Significant microsynteny with new evolutionary highlights is detected between Arabidopsis and legume model plants despite the lack of macrosynteny.
Article in Molecular genetics and genomics : MGG, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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Who cites it
19 citing papers in PubMed.
- Orthology and synteny analysis of receptor-like kinases "RLK" and receptor-like proteins "RLP" in legumes.BMC genomics · 2021Article
- Colonization of root cells and plant growth promotion by Piriformospora indica occurs independently of plant common symbiosis genes.Frontiers in plant science · 2015Article
- Comparative phylogenomics uncovers the impact of symbiotic associations on host genome evolution.PLoS genetics · 2014Article
- Overexpression of AtGRDP2, a novel glycine-rich domain protein, accelerates plant growth and improves stress tolerance.Frontiers in plant science · 2014Article
- The cytochrome P450 genesis locus: the origin and evolution of animal cytochrome P450s.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2013Article
- Mining plant genome browsers as a means for efficient connection of physical, genetic and cytogenetic mapping: An example using soybean.Genetics and molecular biology · 2012Article
- Ancestral synteny shared between distantly-related plant species from the asterid (Coffea canephora and Solanum Sp.) and rosid (Vitis vinifera) clades.BMC genomics · 2012Article
- Syntenic relationships among legumes revealed using a gene-based genetic linkage map of common bean (Phaseolus vulgaris L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2010Article
- Legume transcription factor genes: what makes legumes so special?Plant physiology · 2009Review
- Microcollinearity in an ethylene receptor coding gene region of the Coffea canephora genome is extensively conserved with Vitis vinifera and other distant dicotyledonous sequenced genomes.BMC plant biology · 2009Article
- Synteny of Prunus and other model plant species.BMC genomics · 2009Article
- Sequencing and comparative analysis of a conserved syntenic segment in the Solanaceae.Genetics · 2008Article
- Dwarf plants of diploid Medicago sativa carry a mutation in the gibberellin 3-beta-hydroxylase gene.Plant cell reports · 2008Article
- Functional adaptation of a plant receptor-kinase paved the way for the evolution of intracellular root symbioses with bacteria.PLoS biology · 2008Article
- Structure of two melon regions reveals high microsynteny with sequenced plant species.Molecular genetics and genomics : MGG · 2007Article
- Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome.Plant molecular biology · 2007Article
- Genome sequencing and genome resources in model legumes.Plant physiology · 2007Review
- Fine mapping of the clubroot resistance gene, Crr3, in Brassica rapa.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006Article
- Strategies to obtain stable transgenic plants from non-embryogenic lines: complementation of the nn1 mutation of the NORK gene in Medicago sativa MN1008.Plant cell reports · 2006Article
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Authors and funding
8 authors.
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Abstract
The increased amount of data produced by large genome sequencing projects allows scientists to carry out important syntenic studies to a great extent. Detailed genetic maps and entirely or partially sequenced genomes are compared, and macro- and microsyntenic relations can be determined for different species. In our study, the syntenic relationships between key legume plants and two model plants, Arabidopsis thaliana and Populus trichocarpa were investigated. The comparison of the map position of 172 gene-based Medicago sativa markers to the organization of homologous A. thaliana genes could not identify any sign of macrosynteny between the two genomes. A 276 kb long section of chromosome 5 of the model legume Medicago truncatula was used to investigate potential microsynteny with the other legume Lotus japonicus, as well as with Arabidopsis and Populus. Besides the overall correlation found between the legume plants, the comparison revealed several microsyntenic regions in the two more distant plants with significant resemblance. Despite the large phylogenetic distance, clear microsyntenic regions between Medicago and Arabidopsis or Populus were detected unraveling new intragenomic evolutionary relations in Arabidopsis.
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