Evidence map›Paper›PMID 16272493›Full record

ArticleJournal of clinical microbiology2005

Population structure and properties of Candida albicans, as determined by multilocus sequence typing.

Arianna Tavanti, Amanda D Davidson, Mark J Fordyce, Neil A R Gow, Martin C J Maiden, Frank C Odds

Abstract readComparative Study
In one paragraph

Article in Journal of clinical microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed.

  1. Article
  2. Candida krusei (Pichia kudriavzevii) multilocus sequence typing and antifungal susceptibility profile in Cameroon.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
    Article
  3. White-opaque switching inMicrobiology and molecular biology reviews : MMBR · 2024
    Review
  4. Article
  5. Genetic Diversity of Human Fungal Pathogens.Current clinical microbiology reports · 2023
    Article
  6. Article
  7. A New Phenotype inmBio · 2023
    Article
  8. Molecular epidemiology ofFrontiers in veterinary science · 2023
    Article
  9. Article
  10. Frontiers in medicine · 2022
    Article
  11. Article
  12. Danish Whole-Genome-SequencedJournal of fungi (Basel, Switzerland) · 2021
    Article
  13. Differentiation ofCurrent medical mycology · 2021
    Article
  14. Article
  15. Parasexuality ofFrontiers in cellular and infection microbiology · 2021
    Review
  16. Article
  17. mSphere · 2020
    Article
  18. Genotyping Reveals High Clonal Diversity and Widespread Genotypes ofFrontiers in cellular and infection microbiology · 2020
    Article
  19. Review
  20. Mechanisms of genome evolution in Candida albicans.Current opinion in microbiology · 2019
    Review

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Arianna TavantiInstitute of Medical Sciences, University of Aberdeen, Aberdeen AB25 2ZD, United Kingdom.
Amanda D Davidson
Mark J Fordyce
Neil A R Gow
Martin C J Maiden
Frank C Odds

Funding

Wellcome Trust
6 · The paper itself

Abstract

We submitted a panel of 416 isolates of Candida albicans from separate sources to multilocus sequence typing (MLST). The data generated determined a population structure in which four major clades of closely related isolates were delineated, together with eight minor clades comprising five or more isolates. By Fisher's exact test, a statistically significant association was found between particular clades and the anatomical source, geographical source, ABC genotype, decade of isolation, and homozygosity versus heterozygosity at the mating type-like locus (MTL) of the isolates in the clade. However, these associations may have been influenced by confounding variables, since in a univariate analysis of variance, only the clade associations with ABC type and anatomical source emerged as statistically significant, providing the first indication of possible differences between C. albicans strain type clades and their propensity to infect or colonize different anatomical locations. There were no significant differences between clades with respect to distributions of isolates resistant to fluconazole, itraconazole, or flucytosine. However, the majority of flucytosine-resistant isolates belonged to clade 1, and these isolates, but not flucytosine-resistant isolates in other clades, bore a unique mutation in the FUR1 gene that probably accounts for their resistance. A significantly higher proportion of isolates resistant to fluconazole, itraconazole, and flucytosine were homozygous at the MTL, suggesting that antifungal pressure may trigger a common mechanism that leads both to resistance and to MTL homozygosity. The utility of MLST for determining clade assignments of clinical isolates will form the basis for strain selection for future research into C. albicans virulence.

Indexed as

Analysis of VarianceAntifungal AgentsBloodCandida albicansCandidiasisDrug Resistance, FungalEuropeFemaleGenes, FungalHumansMycological Typing TechniquesNorth AmericaOropharynxPhylogenySequence AnalysisSpecies SpecificityAntifungal Agents

Identifiers

PMID16272493
PMCPMC1287804

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.