Evidence map›Paper›PMID 16269698›Full record

ArticleApplied and environmental microbiology2005

Identification of Shewanella baltica as the most important H2S-producing species during iced storage of Danish marine fish.

Birte Fonnesbech Vogel, Kasthuri Venkateswaran, Masataka Satomi, Lone Gram

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Microbiological analysis of skin lesions of codJournal of veterinary research · 2024
    Article
  6. Article
  7. Article
  8. Comparative genome analysis of the genusFrontiers in microbiology · 2023
    Article
  9. Review
  10. Article
  11. Growth and Spoilage Potential of anFoods (Basel, Switzerland) · 2022
    Article
  12. Article
  13. Article
  14. Genomic Analysis of Two Representative Strains ofFoods (Basel, Switzerland) · 2022
    Article
  15. Article
  16. Article
  17. Three Microbial Musketeers of the Seas:International journal of molecular sciences · 2022
    Article
  18. Comparative Transcriptome Analysis ofFrontiers in cellular and infection microbiology · 2022
    Article
  19. Genome collection ofFrontiers in microbiology · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Birte Fonnesbech VogelDanish Institute for Fisheries Research, Department of Seafood Research, Søltofts Plads, c/o Technical University of Denmark, Bldg. 221, DK-2800 Kgs. Lyngby, Denmark. bfv@dfu.min.dk
Kasthuri Venkateswaran
Masataka Satomi
Lone Gram

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shewanella putrefaciens has been considered the main spoilage bacteria of low-temperature stored marine seafood. However, psychrotropic Shewanella have been reclassified during recent years, and the purpose of the present study was to determine whether any of the new Shewanella species are important in fish spoilage. More than 500 H2S-producing strains were isolated from iced stored marine fish (cod, plaice, and flounder) caught in the Baltic Sea during winter or summer time. All strains were identified as Shewanella species by phenotypic tests. Different Shewanella species were present on newly caught fish. During the warm summer months the mesophilic human pathogenic S. algae dominated the H2S-producing bacterial population. After iced storage, a shift in the Shewanella species was found, and most of the H2S-producing strains were identified as S. baltica. The 16S rRNA gene sequence analysis confirmed the identification of these two major groups. Several isolates could only be identified to the genus Shewanella level and were separated into two subgroups with low (44%) and high (47%) G+C mol%. The low G+C% group was isolated during winter months, whereas the high G+C% group was isolated on fish caught during summer and only during the first few days of iced storage. Phenotypically, these strains were different from the type strains of S. putrefaciens, S. oneidensis, S. colwelliana, and S. affinis, but the high G+C% group clustered close to S. colwelliana by 16S rRNA gene sequence comparison. The low G+C% group may constitute a new species. S. baltica, and the low G+C% group of Shewanella spp. strains grew well in cod juice at 0 degrees C, but three high G+C Shewanella spp. were unable to grow at 0 degrees C. In conclusion, the spoilage reactions of iced Danish marine fish remain unchanged (i.e., trimethylamine-N-oxide reduction and H2S production); however, the main H2S-producing organism was identified as S. baltica.

Indexed as

IceAnimalsDenmarkDNA, BacterialDNA, RibosomalFishesFlounderFood HandlingGenes, rRNAHydrogen SulfideMolecular Sequence DataPhylogenyRNA, Ribosomal, 16SSeawaterSequence Analysis, DNAShewanellaDNA, BacterialDNA, RibosomalHydrogen SulfideIceRNA, Ribosomal, 16S

Identifiers

PMID16269698
PMCPMC1287644

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.