Evidence map›Paper›PMID 16254075›Full record

ArticleNucleic acids research2005

Partial 13C isotopic enrichment of nucleoside monophosphates: useful reporters for NMR structural studies.

Anita I Kishore, Michael R Mayer, James H Prestegard

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Anita I KishoreComplex Carbohydrate Research Center, University of Georgia, Athens, GA 30602-4712, USA.
Michael R Mayer
James H Prestegard
University of Georgia · US

Funding

NMR APPROACHES TO MEMBRANE ASSOCIATED ARF STRUCTURESR01GM061268 · NIGMS · UNIVERSITY OF GEORGIA (UGA) · PI PRESTEGARD, JAMES H. · 2000 to 2014
$2.9M
NIGMS NIH HHS GM61268NIGMS NIH HHS R01 GM061268
6 · The paper itself

Abstract

Analysis of the 13C isotopic labeling patterns of nucleoside monophosphates (NMPs) extracted from Escherichia coli grown in a mixture of C-1 and C-2 glucose is presented. By comparing our results to previous observations on amino acids grown in similar media, we have been able to rationalize the labeling pattern based on the well-known biochemistry of nucleotide biosynthesis. Except for a few notable absences of label (C4 in purines and C3' in ribose) and one highly enriched site (C1' in ribose), most carbons are randomly enriched at a low level (an average of 13%). These sparsely labeled NMPs give less complex NMR spectra than their fully isotopically labeled analogs due to the elimination of most 13C-13C scalar couplings. The spectral simplicity is particularly advantageous when working in ordered systems, as illustrated with guanosine diphosphate (GDP) bound to ADP ribosylation factor 1 (ARF1) aligned in a liquid crystalline medium. In this system, the absence of scalar couplings and additional long-range dipolar couplings significantly enhances signal to noise and resolution.

Indexed as

Carbon IsotopesNuclear Magnetic Resonance, BiomolecularADP-Ribosylation Factor 1Escherichia coliGuanosine DiphosphateIsotope LabelingNucleotidesPentose Phosphate PathwayPurinesPyrimidinesUridine MonophosphateADP-Ribosylation Factor 1Carbon IsotopesGuanosine DiphosphateNucleotidesPurinesPyrimidinesUridine Monophosphate

Identifiers

PMID16254075
PMCPMC1270954
OpenAlexW2133295265

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.