Evidence map›Paper›PMID 16253116›Full record

ArticleThe Biochemical journal2006

Minimal features of paxillin that are required for the tyrosine phosphorylation of focal adhesion kinase.

Ramon Wade, Scott Vande Pol

Open access · bronzeAbstract read
In one paragraph

Article in The Biochemical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

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  6. An update of biochemical markers of hepatocellular carcinoma.International journal of health sciences · 2016
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ramon WadeDepartment of Pathology, University of Virginia, P.O. Box 800904, Charlottesville, VA 22908-0904, USA.
Scott Vande Pol
University of Virginia · US

Funding

Papillomavirus TransformationR01CA069292 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI VANDE POL, SCOTT BRIAN · 2002 to 2006
$1.4M
STRUCTURAL FEATURES OF PAPILLOMAVIRUS E6 ONCOPROTEINSR01CA080931 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI VANDE POL, SCOTT BRIAN · 2000 to 2004
$1.3M
PAPILLOMAVIRUS TRANSFORMATIONR29CA069292 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI VANDE POL, SCOTT B · 1996 to 2000
$35k
NCI NIH HHS CA-69292NCI NIH HHS CA-80931NCI NIH HHS R01 CA069292NCI NIH HHS R01 CA080931NCI NIH HHS R29 CA069292
6 · The paper itself

Abstract

Tyrosine phosphorylation of FAK (focal adhesion kinase) regulates signalling that results from the interaction of integrins with extracellular matrix and growth factor receptors. A critical step in this process is the phosphorylation of Tyr397 of FAK, which creates a binding site for Src family kinases, PI3K (phosphoinositide 3-kinase) and Shc (Src homology and collagen homology). An intact Tyr397 site is required for FAK-mediated regulation of cell migration, survival signals and full responsiveness to soluble growth factors. We showed previously that the adaptor protein paxillin is required for the overall tyrosine phosphorylation of FAK in embryonic stem cells [Wade, Bohl and Vande Pol (2002) Oncogene 21, 96-107]. In the present paper, we identify the minimal structural features of paxillin that are required to support overall FAK tyrosine phosphorylation and Tyr397 phosphorylation. Paxillin contains N-terminal leucine-rich LD motifs that bind directly to FAK and four LIM (Lin-11, Isl-1 and Mec-3) domains in the C-terminus. We show that paxillin LIM domains 1, 2 and 3 are each required for FAK tyrosine phosphorylation, while LIM4 is dispensable. In addition to paxillin LIM domains 1, 2 and 3, a single LD motif on paxillin is required to support FAK tyrosine phosphorylation in embryonic stem cells. Both sequence and spatial requirements exist for LD motifs to support FAK tyrosine phosphorylation. Interestingly, synthetic LD motifs that fail to bind FAK in vitro are able to fully support FAK tyrosine phosphorylation, indicating that minimal interactions of LD motifs with FAK suffice. Our results demonstrate at least four distinct structural domains of paxillin support at least three distinct functions that are each required for FAK tyrosine phosphorylation.

Indexed as

Amino Acid MotifsAnimalsCell LineCell MovementFocal Adhesion Protein-Tyrosine KinasesGene DeletionGene Expression RegulationMicePaxillinPhosphorylationPhosphotyrosineProtein BindingProtein Structure, TertiaryProtein TransportFocal Adhesion Protein-Tyrosine KinasesPaxillinPhosphotyrosine

Identifiers

PMID16253116
PMCPMC1360707
OpenAlexW2092367319

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.