Evidence map›Paper›PMID 16252232›Full record

ArticleAmerican journal of human genetics2005

Mutations in TCF8 cause posterior polymorphous corneal dystrophy and ectopic expression of COL4A3 by corneal endothelial cells.

Charles M Krafchak, Hemant Pawar, Sayoko E Moroi, Alan Sugar, Paul R Lichter, David A Mackey, Shahzad Mian, Theresa Nairus, Victor Elner, Miriam T Schteingart and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 100 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
100citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

100 citing papers in PubMed, 1 synthesis or guideline pooled it, 225 citations in OpenAlex.

  1. Pooled it
  2. From Genes to Disease: ReassessingInternational journal of molecular sciences · 2025
    Article
  3. Article
  4. Loss-of-function variants inJournal of medical genetics · 2024
    Article
  5. Disruption ofHuman mutation · 2024
    Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Update on the genetics of corneal endothelial dystrophies.Indian journal of ophthalmology · 2022
    Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Review
  17. Article
  18. Inactivation ofDisease models & mechanisms · 2020
    Article
  19. Review
  20. CUGC for posterior polymorphous corneal dystrophy (PPCD).European journal of human genetics : EJHG · 2020
    Article

40 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 4 institutions in 2 countries.

Charles M KrafchakDepartment of Ophthalmology and Visual Sciences, W. K. Kellogg Eye Center, University of Michigan, Ann Arbor, MI 48105, USA.
Hemant Pawar
Sayoko E Moroi
Alan Sugar
Paul R Lichter
David A Mackey
Shahzad Mian
Theresa Nairus
Victor Elner
Miriam T Schteingart
Catherine A Downs
Theresa Guckian Kijek
Jenae M Johnson
Edward H Trager
Frank W Rozsa
Md Nawajes Ali Mandal
Michael P Epstein
Douglas Vollrath
Radha Ayyagari
Michael Boehnke
Julia E Richards
University of Michigan–Ann Arbor · USEmory University · USStanford University · USUniversity of Tasmania · AU

Funding

VIVARIUM MODULEP30EY007003 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI David Antonetti · 1987 to 2026
$17.6M
University of Michigan Training Program in Genomic ScienceT32HG000040 · NHGRI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Sebastian Zoellner · 1995 to 2026
$16.4M
MOLECULAR GENETICS OF PRIMARY OPEN ANGLE GLAUCOMAR01EY011671 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RICHARDS, JULIA E · 1998 to 2011
$5.0M
MOLECULAR GENETICS OF OPEN ANGLE GLAUCOMAR01EY011405 · NEI · STANFORD UNIVERSITY · PI VOLLRATH, DOUGLAS E. · 1996 to 2011
$4.6M
RPE-Mphi Binding: Ca++_&O2-_Dependent AMD ResponsesR01EY009441 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELNER, VICTOR M · 1992 to 2008
$3.2M
Molecular Genetics of Primary Open-angle GlaucomaR56EY011671 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RICHARDS, JULIA E · 2008 to 2008
$369k
E75 IN THE DEVELOPING DROSOPHILA EYEF31EY007003 · NEI · YALE UNIVERSITY · PI SHILTON, ALYCIA N · 1999 to 2001
$14k
NEI NIH HHS EY07003NEI NIH HHS EY09441NEI NIH HHS EY11405NEI NIH HHS EY11671NEI NIH HHS F31 EY007003NEI NIH HHS P30 EY007003NEI NIH HHS R01 EY009441NEI NIH HHS R01 EY011405NEI NIH HHS R01 EY011671NEI NIH HHS R56 EY011671NHGRI NIH HHS T32 HG000040NHGRI NIH HHS T32 HG00040
6 · The paper itself

Abstract

Posterior polymorphous corneal dystrophy (PPCD, also known as PPMD) is a rare disease involving metaplasia and overgrowth of corneal endothelial cells. In patients with PPCD, these cells manifest in an epithelial morphology and gene expression pattern, produce an aberrant basement membrane, and, sometimes, spread over the iris and nearby structures in a way that increases the risk for glaucoma. We previously mapped PPCD to a region (PPCD3) on chromosome 10 containing the gene that encodes the two-handed zinc-finger homeodomain transcription factor TCF8. Here, we report a heterozygous frameshift mutation in TCF8 that segregates with PPCD in the family used to map PPCD3 and four different heterozygous nonsense and frameshift mutations in TCF8 in four other PPCD probands. Family reports of inguinal hernia, hydrocele, and possible bone anomalies in affected individuals suggest that individuals with TCF8 mutations should be examined for nonocular anomalies. We detect transcripts of all three identified PPCD genes (VSX1, COL8A2, and TCF8) in the cornea. We show presence of a complex (core plus secondary) binding site for TCF8 in the promoter of Alport syndrome gene COL4A3, which encodes collagen type IV alpha 3, and we present immunohistochemical evidence of ectopic expression of COL4A3 in corneal endothelium of the proband of the original PPCD3 family. Identification of TCF8 as the PPCD3 gene provides a valuable tool for the study of critical gene regulation events in PPCD pathology and suggests a possible role for TCF8 mutations in altered structure and function of cells lining body cavities other than the anterior chamber of the eye. Thus, this study has identified TCF8 as the gene responsible for approximately half of the cases of PPCD, has implicated TCF8 mutations in developmental abnormalities outside the eye, and has presented the TCF8 regulatory target, COL4A3, as a key, shared molecular component of two different diseases, PPCD and Alport syndrome.

Indexed as

AutoantigensCollagen Type IVCorneal Dystrophies, HereditaryDNAEndothelium, CornealHaplotypesHomeodomain ProteinsHumansMutationPedigreePhenotypeTranscription FactorsZinc Finger E-box-Binding Homeobox 1AutoantigensCollagen Type IVDNAHomeodomain ProteinsTranscription Factorstype IV collagen alpha3 chainZEB1 protein, humanZinc Finger E-box-Binding Homeobox 1

Identifiers

PMID16252232
PMCPMC1271382
OpenAlexW2160479367

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.