Evidence map›Paper›PMID 16251997›Full record

ArticleGene therapy2006

p27(SJ), a novel protein in St John's Wort, that suppresses expression of HIV-1 genome.

N Darbinian-Sarkissian, A Darbinyan, J Otte, S Radhakrishnan, B E Sawaya, A Arzumanyan, G Chipitsyna, Y Popov, J Rappaport, S Amini and 1 more

Abstract read
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In one paragraph

Article in Gene therapy, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
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  5. Frontiers in neuroscience · 2023
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  6. DING Proteins Extend to the Extremophilic World.International journal of molecular sciences · 2021
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  9. Effect of photodynamic inactivation of Escherichia coli by hypericin.World journal of microbiology & biotechnology · 2018
    Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Article
  16. DING proteins: numerous functions, elusive genes, a potential for health.Cellular and molecular life sciences : CMLS · 2013
    Review
  17. Article
  18. Crystallization and preliminary X-ray diffraction analysis of a DING protein from Pseudomonas aeruginosa PA14.Acta crystallographica. Section F, Structural biology and crystallization communications · 2013
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

N Darbinian-SarkissianDepartment of Neuroscience, Center for Neurovirology, Temple University School of Medicine, Philadelphia, PA, USA.
A Darbinyan
J Otte
S Radhakrishnan
B E Sawaya
A Arzumanyan
G Chipitsyna
Y Popov
J Rappaport
S Amini
K Khalili
Temple University · USYerevan State University · AM

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcription of the HIV-1 genome is controlled by the cooperation of viral regulatory proteins and several host factors which bind to specific DNA sequences within the viral promoter spanning the long terminal repeat, (LTR). Here, we describe the identification of a novel protein, p27(SJ), present in a laboratory callus culture of Hypericum perforatum (St John's Wort) that suppresses transcription of the HIV-1 genome in several human cell types including primary culture of microglia and astrocytes. p27(SJ) associates with C/EBPbeta, a transcription factor that regulates expression of the HIV-1 genome in macrophages and monocytic cells, and the viral transactivator, Tat. The association of p27(SJ) with C/EBPbeta and Tat alters their subcellular localization, causing their accumulation in the perinuclear cytoplasmic compartment of the cells. Fusion of a nuclear localization signal to p27(SJ) forces its entry into the nucleus and diminishes the capacity of p27(SJ) to suppress Tat activity, but does not alter its ability to suppress C/EBPbeta activation of the LTR. Results from binding assays showed the inhibitory effect of p27(SJ) on C/EBPbeta interaction with DNA. Finally, our results demonstrate that expression of p27(SJ) decreases the level of viral replication in HIV-1-infected cells. These observations suggest the potential for the development of a therapeutic advance based on p27(SJ) protein to control HIV-1 transcription and replication in cells associated with HIV-1 infection in the brain.

Indexed as

HypericumAstrocytesBase SequenceCells, CulturedDepression, ChemicalGene Expression Regulation, ViralGenetic TherapyGenome, ViralHIV-1HIV InfectionsHumansMicrogliaMolecular Sequence DataPhytotherapyPlant ProteinsTerminal Repeat Sequencesp27(SJ) protein, St John's WortPlant Proteins

Identifiers

PMID16251997
OpenAlexW1975159949

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.