Evidence map›Paper›PMID 16247006›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Pore conformations and gating mechanism of a Cys-loop receptor.

Yoav Paas, Gilad Gibor, Regis Grailhe, Nathalie Savatier-Duclert, Virginie Dufresne, Morten Sunesen, Lia Prado de Carvalho, Jean-Pierre Changeux, Bernard Attali

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
  2. The nicotinic acetylcholine receptor: a typical 'allosteric machine'.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2018
    Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Synaptic neurotransmitter-gated receptors.Cold Spring Harbor perspectives in biology · 2012
    Review
  9. Article
  10. Article
  11. Chloride ions in the pore of glycine and GABA channels shape the time course and voltage dependence of agonist currents.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2011
    Article
  12. Article
  13. Article
  14. Article
  15. Structure-function study of the fourth transmembrane segment of the GABAρ1 receptor.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  16. Article
  17. One-microsecond molecular dynamics simulation of channel gating in a nicotinic receptor homologue.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yoav PaasRécepteurs et Cognition, Unité de Recherche Associée 2182 Centre National de la Recherche Scientifique, Institut Pasteur, 25 Rue du Docteur Roux, 75724 Paris Cedex 15, France. yopaas@netvision.net.il
Gilad Gibor
Regis Grailhe
Nathalie Savatier-Duclert
Virginie Dufresne
Morten Sunesen
Lia Prado de Carvalho
Jean-Pierre Changeux
Bernard Attali

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neurons regulate the propagation of chemoelectric signals throughout the nervous system by opening and closing ion channels, a process known as gating. Here, histidine-based metal-binding sites were engineered along the intrinsic pore of a chimeric Cys-loop receptor to probe state-dependent Zn(2+)-channel interactions. Patterns of Zn(2+) ion binding within the pore reveal that, in the closed state, the five pore-lining segments adopt an oblique orientation relative to the axis of ion conduction and constrict into a physical gate at their intracellular end. The interactions of Zn(2+) with the open state indicate that the five pore-lining segments should rigidly tilt to enable the movement of their intracellular ends away from the axis of ion conduction, so as to open the constriction (i.e., the gate). Alignment of the functional results with the 3D structure of an acetylcholine receptor allowed us to generate structural models accounting for the closed and open pore conformations and for a gating mechanism of a Cys-loop receptor.

Indexed as

Ion Channel GatingAnimalsCell LineCell Membrane PermeabilityElectrophysiologyHumansIon ChannelsNeuronsOocytesPorosityProtein ConformationProtein EngineeringReceptors, CholinergicRecombinant Fusion ProteinsXenopusZincIon ChannelsReceptors, CholinergicRecombinant Fusion ProteinsZinc

Identifiers

PMID16247006
PMCPMC1276086

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.