Evidence map›Paper›PMID 16242812›Full record

ArticleNeurobiology of aging2006

Gene expression correlates of neurofibrillary tangles in Alzheimer's disease.

Travis Dunckley, Thomas G Beach, Keri E Ramsey, Andrew Grover, Diego Mastroeni, Douglas G Walker, Bonnie J LaFleur, Keith D Coon, Kevin M Brown, Richard Caselli and 9 more

Open access · greenAbstract readControlled Clinical Trial
In one paragraph

Article in Neurobiology of aging, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed, 2 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 2 syntheses or guidelines pooled it, 179 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Epigenetic changes in the progression of Alzheimer's disease.Mechanisms of ageing and development · 2013
    Trial
  4. Trial
  5. Article
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  20. The Inflammatory GeneBiomedicines · 2023
    Article

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 1 country.

Travis DunckleyNeurogenomics Division, Translational Genomics Research Institute, 445 North 5th Street, Phoenix, AZ 85004, USA.
Thomas G Beach
Keri E Ramsey
Andrew Grover
Diego Mastroeni
Douglas G Walker
Bonnie J LaFleur
Keith D Coon
Kevin M Brown
Richard Caselli
Walter Kukull
Roger Higdon
Daniel McKeel
John C Morris
Christine Hulette
Donald Schmechel
Eric M Reiman
Joseph Rogers
Dietrich A Stephan
Translational Genomics Research Institute · USAlzheimer’s Disease Neuroimaging Initiative · USDuke University · USMayo Clinic in Arizona · USVanderbilt University · US

Funding

NATIONAL ALZHEIMERS COORDINATING CENTER (NACC)U01AG016976 · NIA · UNIVERSITY OF WASHINGTON · PI KUKULL, WALTER ANTHONY · 1999 to 2020
$72.8M
Smartphone-Based "Burst" Cognitive AssessmentsP01AG003991 · NIA · WASHINGTON UNIVERSITY · PI JOHN MORRIS · 1985 to 2026
$69.5M
WASHINGTON UNIVERSITY ALZHEIMERS DISEASE RESEARCH CENTERP50AG005681 · NIA · WASHINGTON UNIVERSITY · PI MORRIS, JOHN · 1985 to 2019
$52.1M
Research Education ComponentP30AG019610 · NIA · SUN HEALTH RESEARCH INSTITUTE · PI GONZALEZ HERNANDEZ, GRACIELA · 2001 to 2020
$32.5M
TASTE AND SMELL MEASUREMENTS OF PATIENTS AT RISK FOR ALZHEIMER'S DISEASEP50AG005128 · NIA · DUKE UNIVERSITY · PI WELSH-BOHMER, KATHLEEN ANNE · 1985 to 2005
$11.2M
Neurogenomics of Alzheimer's Disease and AgingR01AG023193 · NIA · TRANSLATIONAL GENOMICS RESEARCH INST · PI DUNCKLEY, TRAVIS L · 2003 to 2007
$2.6M
Neurofibrillary Tangle-Induced Dementia in ADK01AG024079 · NIA · TRANSLATIONAL GENOMICS RESEARCH INST · PI DUNCKLEY, TRAVIS L · 2006 to 2010
$569k
NIA NIH HHS 1-RO1-AG023193NIA NIH HHS AG05128NIA NIH HHS K01 AG024079NIA NIH HHS P01 AG003991NIA NIH HHS P01 AG03991NIA NIH HHS P30 AG019610NIA NIH HHS P30 AG19610NIA NIH HHS P50 AG005128NIA NIH HHS P50 AG005681NIA NIH HHS P50 AG05681NIA NIH HHS R01 AG023193NIA NIH HHS U01 AG016976NIA NIH HHS U01AG016976
6 · The paper itself

Abstract

Neurofibrillary tangles (NFT) constitute one of the cardinal histopathological features of Alzheimer's disease (AD). To explore in vivo molecular processes involved in the development of NFTs, we compared gene expression profiles of NFT-bearing entorhinal cortex neurons from 19 AD patients, adjacent non-NFT-bearing entorhinal cortex neurons from the same patients, and non-NFT-bearing entorhinal cortex neurons from 14 non-demented, histopathologically normal controls (ND). Of the differentially expressed genes, 225 showed progressively increased expression (AD NFT neurons > AD non-NFT neurons > ND non-NFT neurons) or progressively decreased expression (AD NFT neurons < AD non-NFT neurons < ND non-NFT neurons), raising the possibility that they may be related to the early stages of NFT formation. Immunohistochemical studies confirmed that many of the implicated proteins are dysregulated and preferentially localized to NFTs, including apolipoprotein J, interleukin-1 receptor-associated kinase 1, tissue inhibitor of metalloproteinase 3, and casein kinase 2, beta. Functional validation studies are underway to determine which candidate genes may be causally related to NFT neuropathology, thus providing therapeutic targets for the treatment of AD.

Indexed as

Aged, 80 and overEntorhinal CortexFemaleGene ExpressionGene Expression ProfilingHumansMaleNerve Tissue ProteinsNeurofibrillary TanglesNerve Tissue Proteins

Identifiers

PMID16242812
PMCPMC2259291
OpenAlexW2005889734

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.