Evidence map›Paper›PMID 16237459›Full record

ArticleThe EMBO journal2005

Two transactivation mechanisms cooperate for the bulk of HIF-1-responsive gene expression.

Lawryn H Kasper, Fayçal Boussouar, Kelli Boyd, Wu Xu, Michelle Biesen, Jerold Rehg, Troy A Baudino, John L Cleveland, Paul K Brindle

Abstract read
In one paragraph

Article in The EMBO journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 95 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
95citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

95 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Guideline
  2. Guideline
  3. Pooled it
  4. Article
  5. Article
  6. Transcriptional elongation control of hypoxic response.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Review
  8. P300/CBP Regulates HIF-1-Dependent Sympathetic Activation and Hypertension by Intermittent Hypoxia.American journal of respiratory cell and molecular biology · 2024
    Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. Mitochondrial Factors in the Cell Nucleus.International journal of molecular sciences · 2023
    Review
  14. Review
  15. Article
  16. Review
  17. Regulation of Transactivation at C-TAD Domain of HIF-1Oxidative medicine and cellular longevity · 2022
    Review
  18. Oxygen-sensing mechanisms in development and tissue repair.Development (Cambridge, England) · 2021
    Review
  19. Article
  20. Article

35 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Lawryn H KasperDepartment of Biochemistry, St Jude Children's Research Hospital, Memphis, TN 38105, USA.
Fayçal Boussouar
Kelli Boyd
Wu Xu
Michelle Biesen
Jerold Rehg
Troy A Baudino
John L Cleveland
Paul K Brindle

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI SUZANNE J. BAKER · 1985 to 2026
$166.9M
The Bcl-2/Bcl-X Pathway in Myc-Induced LymphomagenesisR01CA076379 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CLEVELAND, JOHN L. · 1998 to 2012
$3.5M
TRANSCRIPTIONAL COACTIVATORS IN HEMATOPOIESISR01CA076385 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BRINDLE, PAUL K · 1998 to 2005
$1.4M
In Vivo Analysis of a Transcriptional Coactivator DomainR01DK058199 · NIDDK · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BRINDLE, PAUL K · 2001 to 2004
$1.1M
In Vivo Analyses of Transcriptional Coactivator DomainsR56DK058199 · NIDDK · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI BRINDLE, PAUL K · 2005 to 2005
$75k
NCI NIH HHS CA076379NCI NIH HHS CA076385NCI NIH HHS P30 CA021765NCI NIH HHS R01 CA076379NCI NIH HHS R01 CA076385NIDDK NIH HHS DK058199NIDDK NIH HHS R01 DK058199NIDDK NIH HHS R56 DK058199
6 · The paper itself

Abstract

The C-terminal activation domain (C-TAD) of the hypoxia-inducible transcription factors HIF-1alpha and HIF-2alpha binds the CH1 domains of the related transcriptional coactivators CREB-binding protein (CBP) and p300, an oxygen-regulated interaction thought to be highly essential for hypoxia-responsive transcription. The role of the CH1 domain in vivo is unknown, however. We created mutant mice bearing deletions in the CH1 domains (DeltaCH1) of CBP and p300 that abrogate their interactions with the C-TAD, revealing that the CH1 domains of CBP and p300 are genetically non-redundant and indispensable for C-TAD transactivation function. Surprisingly, the CH1 domain was only required for an average of approximately 35-50% of global HIF-1-responsive gene expression, whereas another HIF transactivation mechanism that is sensitive to the histone deacetylase inhibitor trichostatin A (TSA(S)) accounts for approximately 70%. Both pathways are required for greater than 90% of the response for some target genes. Our findings suggest that a novel functional interaction between the protein acetylases CBP and p300, and deacetylases, is essential for nearly all HIF-responsive transcription.

Indexed as

Transcriptional ActivationTranscription, GeneticAmino Acid SequenceAnimalsBasic Helix-Loop-Helix ProteinsCREB-Binding ProteinEndothelial PAS Domain-Containing Protein 1Gene Expression ProfilingHumansHydroxamic AcidsHypoxia-Inducible Factor 1, alpha SubunitLungMiceMolecular Sequence DataNeoplasmsp300-CBP Transcription FactorsBasic Helix-Loop-Helix ProteinsCREB-Binding ProteinCrebbp protein, mouseEndothelial PAS Domain-Containing Protein 1Hif1a protein, mouseHydroxamic AcidsHypoxia-Inducible Factor 1, alpha Subunitp300-CBP Transcription FactorsProtein Synthesis Inhibitorstrichostatin A

Identifiers

PMID16237459
PMCPMC1283945

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.