Evidence map›Paper›PMID 16237017›Full record

ArticleJournal of bacteriology2005

Identification of the rctA gene, which is required for repression of conjugative transfer of rhizobial symbiotic megaplasmids.

Daniel Pérez-Mendoza, Edgardo Sepúlveda, Victoria Pando, Socorro Muñoz, Joaquina Nogales, José Olivares, Maria J Soto, José A Herrera-Cervera, David Romero, Susana Brom and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 70 citations in OpenAlex.

  1. Review
  2. Comparative genomic analysis ofApplied and environmental microbiology · 2026
    Article
  3. Article
  4. Article
  5. Frontiers in microbiology · 2023
    Article
  6. Article
  7. Article
  8. Review
  9. Why are rhizobial symbiosis genes mobile?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  10. Article
  11. Transfer of the Symbiotic Plasmid ofFrontiers in microbiology · 2020
    Article
  12. Article
  13. The Divided Bacterial Genome: Structure, Function, and Evolution.Microbiology and molecular biology reviews : MMBR · 2017
    Review
  14. Review
  15. Article
  16. Novel mixed-linkage β-glucan activated by c-di-GMP in Sinorhizobium meliloti.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Daniel Pérez-MendozaDpto. Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, Profesor Albareda 1, 18008 Granada, Spain.
Edgardo Sepúlveda
Victoria Pando
Socorro Muñoz
Joaquina Nogales
José Olivares
Maria J Soto
José A Herrera-Cervera
David Romero
Susana Brom
Juan Sanjuán
Consejo Superior de Investigaciones Científicas · ESEstación Experimental del Zaidín · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An analysis of the conjugative transfer of pRetCFN42d, the symbiotic plasmid (pSym) of Rhizobium etli, has revealed a novel gene, rctA, as an essential element of a regulatory system for silencing the conjugative transfer of R. etli pSym by repressing the transcription of conjugal transfer genes in standard laboratory media. The rctA gene product lacks sequence conservation with other proteins of known function but may belong to the winged-helix DNA-binding subfamily of transcriptional regulators. Similar to that of many transcriptional repressors, rctA transcription seems to be positively autoregulated. rctA expression is greatly reduced upon overexpression of another gene, rctB, previously identified as a putative activator of R. etli pSym conjugal transfer. Thus, rctB seems to counteract the repressive action of rctA. rctA homologs are present in at least three other bacterial genomes within the order Rhizobiales, where they are invariably located adjacent to and divergently transcribed from putative virB-like operons. We show that similar to that of R. etli pSym, conjugative transfer of the 1.35-Mb symbiotic megaplasmid A of Sinorhizobium meliloti is also subjected to the inhibitory action of rctA. Our data provide strong evidence that the R. etli and S. meliloti pSym plasmids are indeed self-conjugative plasmids and that this property would only be expressed under optimal, as yet unknown conditions that entail inactivation of the rctA function. The rctA gene seems to represent novel but probably widespread regulatory systems controlling the transfer of conjugative elements within the order Rhizobiales.

Indexed as

Conjugation, GeneticGene Expression Regulation, BacterialGenes, BacterialGenes, RegulatorDNA Transposable ElementsGene SilencingMutagenesis, InsertionalOperonPlasmidsRhizobium etliSequence Homology, Amino AcidSinorhizobium melilotiSymbiosisSyntenyDNA Transposable Elements

Identifiers

PMID16237017
PMCPMC1272987
OpenAlexW2096684663

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.