Evidence map›Paper›PMID 16227434›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

D-type cyclins activate division in the root apex to promote seed germination in Arabidopsis.

Nompumelelo H Masubelele, Walter Dewitte, Margit Menges, Spencer Maughan, Carl Collins, Rachael Huntley, Jeroen Nieuwland, Simon Scofield, James A H Murray

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
14.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 179 citations in OpenAlex.

  1. Article
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  3. CrWRKY57 and CrABF3 cooperatively activateHorticulture research · 2025
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  8. Seed longevity and genome damage.Bioscience reports · 2024
    Review
  9. Article
  10. The selection and application of peduncle length QTL QPL_6D.1 in modern wheat (Triticum aestivum L.) breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  11. Protein Profiling ofPlants (Basel, Switzerland) · 2023
    Article
  12. Article
  13. Article
  14. Seed DNA damage responses promote germination and growth inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  15. Article
  16. Article
  17. Ectopic Expression of PoplarFrontiers in plant science · 2022
    Article
  18. Article
  19. The DME demethylase regulates sporophyte gene expression, cell proliferation, differentiation, and meristem resurrection.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  20. OverexpressionInternational journal of molecular sciences · 2021
    Article

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Nompumelelo H MasubeleleInstitute of Biotechnology, University of Cambridge, Tennis Court Road, CB2 1QT Cambridge, United Kingdom.
Walter Dewitte
Margit Menges
Spencer Maughan
Carl Collins
Rachael Huntley
Jeroen Nieuwland
Simon Scofield
James A H Murray
University of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Seeds provide survival and dispersal capabilities by protecting the dormant mature plant embryo. Germination and resumption of development under favourable conditions requires the reinitiation of cell growth and division through poorly understood processes. Here we show that four phases of cell division activation during germination in Arabidopsis are related to external morphological changes. Cell division initiates in the root apical meristem (RAM) before root protrusion, followed by sequential activation of cell division in the cotyledons, shoot apical meristem (SAM), and secondary meristems. Major changes in transcript levels of >2,000 genes precede root emergence, including expression peaks of six D-type (CYCD) and two A-type cyclins. Two further CYCDs are activated later with the SAM. Early activated CYCDs play key roles in regulating the extent of cell division, because loss-of-function alleles of early CYCDs display reduced division activation and consequential delayed root emergence. Conversely, elevation of early CYCDs increases cell cycle activation in the RAM and promotes embryonic root (radicle) protrusion, whereas a later-acting CYCD does not. These phenotypes, together with their overlapping expression domains, support a cumulative action of a subset of CYCDs in cell cycle reactivation, rather than a complete functional redundancy. This analysis reveals a phenotype associated with loss-of-function of a plant cyclin and demonstrates that D-type cyclins regulate cell cycle reentry during meristem activation to promote successful germination and early seedling growth.

Indexed as

GerminationArabidopsisCell CycleCell DivisionCyclin DCyclinsPlant RootsSeedlingsCyclin DCyclins

Identifiers

PMID16227434
PMCPMC1266134
OpenAlexW2060677459

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.