Evidence map›Paper›PMID 16225458›Full record

ArticleThe Biochemical journal2006

An intersubunit lock-and-key 'clasp' motif in the dimer interface of Delta class glutathione transferase.

Jantana Wongsantichon, Albert J Ketterman

Abstract read
In one paragraph

Article in The Biochemical journal, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Structural Analysis of theBiomolecules · 2024
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  12. Using affinity chromatography to engineer and characterize pH-dependent protein switches.Protein science : a publication of the Protein Society · 2009
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jantana WongsantichonInstitute of Molecular Biology and Genetics, Mahidol University, Salaya Campus, 25/25 Phutthamonthol Road 4, Salaya, Nakhon Pathom 73170, Thailand.
Albert J Ketterman

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Structural investigations of a GST (glutathione transferase), adGSTD4-4, from the malaria vector Anopheles dirus show a novel lock-and-key 'Clasp' motif in the dimer interface of the Delta class enzyme. This motif also appears to be highly conserved across several insect GST classes, but differs from a previously reported mammalian lock-and-key motif. The aromatic 'key' residue not only inserts into a hydrophobic pocket, the 'lock', of the neighbouring subunit, but also acts as part of the 'lock' for the other subunit 'key'. The 'key' residues from both subunits show aromatic ring stacking with each other in a pi-pi interaction, generating a 'Clasp' in the middle of the subunit interface. Enzyme catalytic and structural characterizations revealed that single amino acid replacements in this 'Clasp' motif impacted on catalytic efficiencies, substrate selectivity and stability. Substitutions to the 'key' residue create strong positive co-operativity for glutathione binding, with a Hill coefficient approaching 2. The lock-and-key motif in general and especially the 'Clasp' motif with the pi-pi interaction appear to play a pivotal role in subunit communication between active sites, as well as in stabilizing the quaternary structure. Evidence of allosteric effects suggests an important role for this particular intersubunit architecture in regulating catalytic activity through conformational transitions of subunits. The observation of co-operativity in the mutants also implies that glutathione ligand binding and dimerization are linked. Quaternary structural changes of all mutants suggest that subunit assembly or dimerization basically manipulates subunit communication.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsAnophelesBinding SitesGene Expression Regulation, EnzymologicGlutathione TransferaseKineticsModels, MolecularProtein BindingProtein EngineeringSequence Homology, Amino AcidSubstrate SpecificityGlutathione Transferase

Identifiers

PMID16225458
PMCPMC1386011

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.