Evidence map›Paper›PMID 16223764›Full record

ArticleThe Journal of physiology2005

High affinity ATP/ADP analogues as new tools for studying CFTR gating.

Zhen Zhou, Xiaohui Wang, Min Li, Yoshiro Sohma, Xiaoqin Zou, Tzyh-Chang Hwang

Open access · greenAbstract read
In one paragraph

Article in The Journal of physiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. The structures of protein kinase A in complex with CFTR: Mechanisms of phosphorylation and noncatalytic activation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Article
  4. Review
  5. Simple binding of protein kinase A prior to phosphorylation allows CFTR anion channels to be opened by nucleotides.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Structural mechanisms of CFTR function and dysfunction.The Journal of general physiology · 2018
    Review
  13. A common mechanism for CFTR potentiators.The Journal of general physiology · 2017
    Article
  14. CFTR potentiators: from bench to bedside.Current opinion in pharmacology · 2017
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. The CFTR ion channel: gating, regulation, and anion permeation.Cold Spring Harbor perspectives in medicine · 2013
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Zhen ZhouDepartment of Medical Pharmacology, University of Missouri-Columbia, Columbia, MO 65211, USA.
Xiaohui Wang
Min Li
Yoshiro Sohma
Xiaoqin Zou
Tzyh-Chang Hwang
University of Missouri · USOsaka Medical and Pharmaceutical University · JP

Funding

MOLECULAR PATHOPHYSIOLOGY OF CYSTIC FIBROSISR01DK055835 · NIDDK · UNIVERSITY OF MISSOURI-COLUMBIA · PI HWANG, TZYH-CHANG · 1999 to 2022
$6.1M
GATING OF CFTR CL CHANNELS BY ATP HYDROLYSISR01HL053445 · NHLBI · UNIVERSITY OF MISSOURI-COLUMBIA · PI HWANG, TZYH-CHANG · 2001 to 2009
$2.3M
Quantitative Structure &Function of ABC TransportersK25DK061529 · NIDDK · UNIVERSITY OF MISSOURI-COLUMBIA · PI ZOU, XIAOQIN · 2002 to 2006
$573k
NHLBI NIH HHS R01 HL053445NIDDK NIH HHS DK61529NIDDK NIH HHS R01 DK055835NIDDK NIH HHS R01DK55835
6 · The paper itself

Abstract

Previous studies using non-hydrolysable ATP analogues and hydrolysis-deficient cystic fibrosis transmembrane conductance regulator (CFTR) mutants have indicated that ATP hydrolysis precedes channel closing. Our recent data suggest that ATP binding is also important in modulating the closing rate. This latter hypothesis predicts that ATP analogues with higher binding affinities should stabilize the open state more than ATP. Here we explore the possibility of using N6-modified ATP/ADP analogues as high-affinity ligands for CFTR gating, since these analogues have been shown to be more potent than native ATP/ADP in other ATP-binding proteins. Among the three N6-modified ATP analogues tested, N6-(2-phenylethyl)-ATP (P-ATP) was the most potent, with a K(1/2) of 1.6 +/- 0.4 microm (>50-fold more potent than ATP). The maximal open probability (P(o)) in the presence of P-ATP was approximately 30% higher than that of ATP, indicating that P-ATP also has a higher efficacy than ATP. Single-channel kinetic analysis showed that as [P-ATP] was increased, the opening rate increased, whereas the closing rate decreased. The fact that these two kinetic parameters have different sensitivities to changes of [P-ATP] suggests an involvement of two different ATP-binding sites, a high-affinity site modulating channel closing and a low affinity site controlling channel opening. The effect of P-ATP on the stability of open states was more evident when ATP hydrolysis was abolished, either by mutating the nucleotide-binding domain 2 (NBD2) Walker B glutamate (i.e. E1371) or by using the non-hydrolysable ATP analogue AMP-PNP. Similar strategies to develop nucleotide analogues with a modified adenine ring could be valuable for future studies of CFTR gating.

Indexed as

Adenosine DiphosphateAdenosine TriphosphateAnimalsATP-Binding Cassette TransportersBinding SitesCHO CellsCricetinaeCystic Fibrosis Transmembrane Conductance RegulatorFemaleHydrolysisIon Channel GatingMembrane PotentialsMutationProtein BindingAdenosine DiphosphateAdenosine TriphosphateATP-Binding Cassette TransportersCystic Fibrosis Transmembrane Conductance RegulatorN6-(2-phenylethyl)-ATP

Identifiers

PMID16223764
PMCPMC1464241
OpenAlexW2112316338

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.