ArticlePlant molecular biology2005
How can we use genomics to improve cereals with rice as a reference genome?
Article in Plant molecular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed.
- Protocol optimization for callus induction and shoot regeneration of Ethiopian rice varieties (Oryza sativa L.).BMC biotechnology · 2025Article
- Accelerating haploid induction rate and haploid validation through marker-assisted selection forFrontiers in plant science · 2024Article
- Verifying the Breeding Value of A Rare Haplotype ofPlants (Basel, Switzerland) · 2022Article
- Recent advancements in molecular marker-assisted selection and applications in plant breeding programmes.Journal, genetic engineering & biotechnology · 2021Review
- Functional Markers for Precision Plant Breeding.International journal of molecular sciences · 2020Review
- Toward Genomics-Based Breeding in C3 Cool-Season Perennial Grasses.Frontiers in plant science · 2017Review
- Predicting Hybrid Performances for Quality Traits through Genomic-Assisted Approaches in Central European Wheat.PloS one · 2016Article
- Core cell cycle regulatory genes in rice and their expression profiles across the growth zone of the leaf.Journal of plant research · 2015Article
- EMS mutagenesis in mature seed-derived rice calli as a new method for rapidly obtaining TILLING mutant populations.Plant methods · 2014Article
- Article
- Molecular characterization of LMW-GS genes in Brachypodium distachyon L. reveals highly conserved Glu-3 loci in Triticum and related species.BMC plant biology · 2012Article
- Functional markers developed from multiple loci in GS3 for fine marker-assisted selection of grain length in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Molecular characterization, expression pattern, and functional analysis of the OsIRL gene family encoding intracellular Ras-group-related LRR proteins in rice.Plant molecular biology · 2010Article
- Systems genetics, bioinformatics and eQTL mapping.Genetica · 2010Review
- Developmenrt of EST-SSR and genomic-SSR markers to assess genetic diversity in Jatropha Curcas L.BMC research notes · 2010Article
- Orthology between genomes of Brachypodium, wheat and rice.BMC research notes · 2009Article
- Identification and mapping of Pi41, a major gene conferring resistance to rice blast in the Oryza sativa subsp. indica reference cultivar, 93-11.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2009Article
- Advances in maize genomics and their value for enhancing genetic gains from breeding.International journal of plant genomics · 2009Article
- Rice molecular breeding laboratories in the genomics era: Current status and future considerations.International journal of plant genomics · 2008Article
- Rice pseudomolecule-anchored cross-species DNA sequence alignments indicate regional genomic variation in expressed sequence conservation.BMC genomics · 2007Article
Corrections and comments
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Authors and funding
3 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Rice serves as a model crop for cereal genomics. The availability of complete genome sequences, together with various genomic resources available for both rice and Arabidopsis, have revolutionized our understanding of the genetic make-up of crop plants. Both macrocolinearity revealed by comparative mapping and microcolinearity revealed by sequence comparisons among the grasses indicate that sequencing and functional analysis of the rice genome will have a significant impact on other cereals in terms of both genomic studies and crop improvement. The availability of mutants, introgression libraries, and advanced transformation techniques make functional genomics in rice and other cereals more manageable than ever before. A wide array of genetic markers, including anchor markers for comparative mapping, SSRs and SNPs are widely used in genetic mapping, germplasm evaluation and marker assisted selection. An integrated database that combines genome information for rice and other cereals is key to the effective utilization of all genomics resources for cereal improvement. To maximize the potential of genomics for plant breeding, experiments must be further miniaturized and costs must be reduced. Many techniques, including targeted gene disruption or allele substitution, insertional mutagenesis, RNA interference and homologous recombination, need to be refined before they can be widely used in functional genomic analysis and plant breeding.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.