Evidence map›Paper›PMID 16214897›Full record

ArticleThe Plant cell2005

Ectopic DICER-LIKE1 expression in P1/HC-Pro Arabidopsis rescues phenotypic anomalies but not defects in microRNA and silencing pathways.

Sizolwenkosi Mlotshwa, Stephen E Schauer, Trenton H Smith, Allison C Mallory, J M Herr, Braden Roth, Delwin S Merchant, Animesh Ray, Lewis H Bowman, Vicki B Vance

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
11.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 74 citations in OpenAlex.

  1. Article
  2. RNA Interference: Promising Approach to Combat Plant Viruses.International journal of molecular sciences · 2022
    Review
  3. Review
  4. Article
  5. Article
  6. EngineeringPlant direct · 2020
    Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Optimal viral strategies for bypassing RNA silencing.Journal of the Royal Society, Interface · 2011
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Sizolwenkosi MlotshwaDepartment of Biological Sciences, University of South Carolina, Columbia, South Carolina 29208, USA.
Stephen E Schauer
Trenton H Smith
Allison C Mallory
J M Herr
Braden Roth
Delwin S Merchant
Animesh Ray
Lewis H Bowman
Vicki B Vance
University of South Carolina · USUniversity of Rochester · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Expression of the viral silencing suppressor P1/HC-Pro in plants causes severe developmental anomalies accompanied by defects in both short interfering RNA (siRNA) and microRNA (miRNA) pathways. P1/HC-Pro transgenic lines fail to accumulate the siRNAs that mediate RNA silencing and are impaired in both miRNA processing and function, accumulating abnormally high levels of miRNA/miRNA* processing intermediates as well as miRNA target messages. Both miRNA and RNA silencing pathways require participation of DICER-LIKE (DCL) ribonuclease III-like enzymes. Here, we investigate the effects of overexpressing DCL1, one of four Dicers in Arabidopsis thaliana, on P1/HC-Pro-induced defects in development and small RNA metabolism. Expression of a DCL1 cDNA transgene (35S:DCL1) produced a mild gain-of-function phenotype and largely rescued dcl1 mutant phenotypes. The 35S:DCL1 plants were competent for virus-induced RNA silencing but were impaired in transgene-induced RNA silencing and in the accumulation of some miRNAs. Ectopic DCL1 largely alleviated developmental anomalies in P1/HC-Pro plants but did not correct the P1/HC-Pro-associated defects in small RNA pathways. The ability of P1/HC-Pro plants to suppress RNA silencing and the levels of miRNAs, miRNA*s, and miRNA target messages in these plants were essentially unaffected by ectopic DCL1. These data suggest that P1/HC-Pro defects in development do not result from general impairments in small RNA pathways and raise the possibility that DCL1 participates in processes in addition to miRNA biogenesis.

Indexed as

ArabidopsisArabidopsis ProteinsCell Cycle ProteinsCysteine EndopeptidasesDNA, ComplementaryDNA, PlantGene Expression Regulation, PlantGene SilencingMicroRNAsMutationPhenotypePlants, Genetically ModifiedPlant VirusesRibonuclease IIIRNA, PlantRNA, Small InterferingArabidopsis ProteinsCell Cycle ProteinsCysteine EndopeptidasesDCL1 protein, ArabidopsisDNA, ComplementaryDNA, PlantHC-Pro protein, potyvirusMicroRNAsRibonuclease IIIRNA, PlantRNA, Small InterferingViral Proteins

Identifiers

PMID16214897
PMCPMC1276016
OpenAlexW2096152713

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.