Evidence map›Paper›PMID 16208522›Full record

ArticlePflugers Archiv : European journal of physiology2006

Inconsistent effects of acidosis on HIF-alpha protein and its target genes.

Carsten Willam, Christina Warnecke, Jörg C Schefold, Jan Kügler, Petra Koehne, Ulrich Frei, Michael Wiesener, Kai-Uwe Eckardt

Abstract read
PubMed Publisher
In one paragraph

Article in Pflugers Archiv : European journal of physiology, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Article
  3. Cell-Type Dependent Regulation of the Electrogenic NaInternational journal of molecular sciences · 2022
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  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Tumor cell metabolism: an integral view.Cancer biology & therapy · 2011
    Review
  12. Review
  13. Review
  14. A dialogue between the hypoxia-inducible factor and the tumor microenvironment.Cancer microenvironment : official journal of the International Cancer Microenvironment Society · 2008
    Article
  15. Hypoxia and the HIF system in kidney disease.Journal of molecular medicine (Berlin, Germany) · 2007
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Carsten WillamDepartment of Nephrology and Hypertension, Medizinische Klinik IV, University of Erlangen-Nuremberg, Germany. carsten.willam@med4.med.uni-erlangen.de
Christina Warnecke
Jörg C Schefold
Jan Kügler
Petra Koehne
Ulrich Frei
Michael Wiesener
Kai-Uwe Eckardt
Charité - Universitätsmedizin Berlin · DEFriedrich-Alexander-Universität Erlangen-Nürnberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transcription factor HIF-1alpha has been identified as a key regulator in the cellular and systemic response to hypoxia. Because hypoxia is frequently associated with acidosis, like in ischemia or tumour growth, we studied the impact of acidosis on the expression of the HIF-1alpha and HIF-2alpha proteins and that of the three HIF target genes carbonic anhydrase-9 (CA-9), glucose transporter-1 (Glut-1) and erythropoietin (EPO). Since the HIF-prolyl hydroxylases (PHD) modulate cellular HIF-alpha protein levels we also investigated changes in PHD mRNA expression under hypoxia and acidosis. HIF-1alpha immunoblots revealed, depending on the cell line investigated, a moderate induction of HIF-alpha protein levels by acidosis in normoxia (Hep3B cells) or hypoxia (HeLa cells). Concordantly, the activity of HIF-driven luciferase reporters was slightly enhanced at pH 7.0. In contrast, HIF target genes exhibited divergent responses to acidosis: basal and hypoxia-induced CA-9 mRNA levels were further increased, whereas hypoxic EPO mRNA induction was attenuated, and Glut-1 mRNA levels were not altered by acidosis. Except from a small increase of hypoxia-induced PHD3 mRNA levels in HeLa cells, there was also no significant effect of acidosis on PHD expression. In conclusion, albeit HIF protein levels slightly induced by acidosis and the inconsistent regulation of HIF target genes under acidosis suggest additional, yet unidentified pH-sensitive factors to be involved in the regulation of these genes.

Indexed as

Gene Expression RegulationAcidosisCarbon DioxideCell LineHumansHypoxiaHypoxia-Inducible Factor 1, alpha SubunitMixed Function OxygenasesRNA, MessengerTranscriptional ActivationTranscription, GeneticCarbon DioxideHIF1A protein, humanHypoxia-Inducible Factor 1, alpha SubunitMixed Function OxygenasesRNA, Messenger

Identifiers

PMID16208522
OpenAlexW2067838946

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.