Evidence map›Paper›PMID 16207815›Full record

ArticleMolecular biology of the cell2005

Caenorhabditis elegans decapping proteins: localization and functional analysis of Dcp1, Dcp2, and DcpS during embryogenesis.

Sabbi Lall, Fabio Piano, Richard E Davis

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. PLAA/UFD-3 regulates P-bodies through its intrinsic disordered domain.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
  4. Germ Granules in Animal Oogenesis.Journal of developmental biology · 2022
    Review
  5. Review
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  8. NcPuf1 Is a Key Virulence Factor inPathogens (Basel, Switzerland) · 2020
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. New insights into the regulation of RNP granule assembly in oocytes.International review of cell and molecular biology · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Sabbi LallDepartment of Biology, City University of New York Graduate Center, College of Staten Island, Staten Island CUNY, New York, NY 10314, USA.
Fabio Piano
Richard E Davis
The Graduate Center, CUNY · USNew York University · US

Funding

IN VIVO ANALYSIS OF SL ADDITION IN ASCARIS EMBRYOSR01AI049558 · NIAID · UNIVERSITY OF COLORADO DENVER · PI DAVIS, RICHARD E. · 2000 to 2015
$4.8M
A Systematic RNAi-based Map of C. elegans EmbryogenesisR01HD046236 · NICHD · NEW YORK UNIVERSITY · PI GUNSALUS, KRISTIN C, PIANO, FABIO · 2004 to 2013
$4.5M
NIAID NIH HHS AI49558NIAID NIH HHS R01 AI049558NICHD NIH HHS 5R01HD046236NICHD NIH HHS R01 HD046236
6 · The paper itself

Abstract

Though posttranscriptional regulation is important for early embryogenesis, little is understood regarding control of mRNA decay during development. Previous work defined two major pathways by which normal transcripts are degraded in eukaryotes. However it is not known which pathways are key in mRNA decay during early patterning or whether developmental transcripts are turned over via specific pathways. Here we show that Caenorhabditis elegans Dcp2 is localized to distinct foci during embryogenesis, reminiscent of P-bodies, the sites of mRNA degradation in yeast and mammals. However the decapping enzyme of the 3' to 5' transcript decay system (DcpS) localizes throughout the cytoplasm, suggesting this degradation pathway is not highly organized. In addition we find that Dcp2 is localized to P-granules, showing that Dcp2 is stored and/or active in these structures. However RNAi of these decapping enzymes has no obvious effect on embryogenesis. In contrast we find that nuclear cap binding proteins (CBP-20 and 80), eIF4G, and PAB-1 are absolutely required for development. Together our data provides further evidence that pathways of general mRNA metabolism can be remarkably organized during development, with two different decapping enzymes localized in distinct cytoplasmic domains.

Indexed as

AnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsEmbryo, NonmammalianEndopeptidasesEndoribonucleasesGene Expression Regulation, DevelopmentalPyrophosphatasesCaenorhabditis elegans Proteinsdcap-2 protein, C elegansdcs-1 protein, C elegansdipeptidyl carboxypeptidaseEndopeptidasesEndoribonucleasesPyrophosphatases

Identifiers

PMID16207815
PMCPMC1289429
OpenAlexW2124035075

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.