ArticleApplied and environmental microbiology2005
Comparison of bacteroides-prevotella 16S rRNA genetic markers for fecal samples from different animal species.
Article in Applied and environmental microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed, 79 citations in OpenAlex.
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- Human-Driven Microbiological Contamination of Benthic and Hyporheic Sediments of an Intermittent Peri-Urban River Assessed from MST and 16S rRNA Genetic Structure Analyses.Frontiers in microbiology · 2017Article
- Comparison of Sewage and Animal Fecal Microbiomes by Using Oligotyping Reveals Potential Human Fecal Indicators in Multiple Taxonomic Groups.Applied and environmental microbiology · 2015Article
- Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.Environmental microbiology reports · 2014Article
- Distribution and abundance of human-specific Bacteroides and relation to traditional indicators in an urban tropical catchment.Journal of applied microbiology · 2014Article
- Intestinal microbiota and species diversity of Campylobacter and Helicobacter spp. in migrating shorebirds in Delaware Bay.Applied and environmental microbiology · 2014Article
- Sewage reflects the distribution of human faecal Lachnospiraceae.Environmental microbiology · 2013Article
- Comparison of gull feces-specific assays targeting the 16S rRNA genes of Catellicoccus marimammalium and Streptococcus spp.Applied and environmental microbiology · 2012Article
- Fecal bacteroidales diversity and decay in response to variations in temperature and salinity.Applied and environmental microbiology · 2011Article
- Analysis of human and animal fecal microbiota for microbial source tracking.The ISME journal · 2011Article
- Characterization of coastal urban watershed bacterial communities leads to alternative community-based indicators.PloS one · 2010Article
- Microbial diversity and host-specific sequences of Canada goose feces.Applied and environmental microbiology · 2009Article
- Development and application of the human intestinal tract chip, a phylogenetic microarray: analysis of universally conserved phylotypes in the abundant microbiota of young and elderly adults.Environmental microbiology · 2009Article
- Detection of Streptococcus pneumoniae strain cocolonization in the nasopharynx.Journal of clinical microbiology · 2009Article
- Bacteroidales diversity in ring-billed gulls (Laurus delawarensis) residing at Lake Michigan beaches.Applied and environmental microbiology · 2009Article
- Terminal restriction fragment length polymorphism for identification of Cryptosporidium species in human feces.Applied and environmental microbiology · 2009Article
- Molecular identification of fecal pollution sources in water supplies by host-specific fecal DNA markers and Terminal Restriction Fragment Length Polymorphism profiles of 16S rRNA gene.Journal of microbiology (Seoul, Korea) · 2008Article
- Phylogenetic diversity and molecular detection of bacteria in gull feces.Applied and environmental microbiology · 2008Article
- Relative abundance of Bacteroides spp. in stools and wastewaters as determined by hierarchical oligonucleotide primer extension.Applied and environmental microbiology · 2008Article
Corrections and comments
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Authors and funding
2 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
To effectively manage surface and ground waters it is necessary to improve our ability to detect and identify sources of fecal contamination. We evaluated the use of the anaerobic bacterial group Bacteroides-Prevotella as a potential fecal indicator. Terminal restriction length polymorphism (T-RFLP) of the 16S rRNA genes from this group was used to determine differences in populations and to identify any unique populations in chickens, cows, deer, dogs, geese, horses, humans, pigs, and seagulls. The group appears to be a good potential fecal indicator in all groups tested except for avians. Cluster analysis of Bacteroides-Prevotella community T-RFLP profiles indicates that Bacteroides-Prevotella populations from samples of the same host species are much more similar to each other than to samples from different source species. We were unable to identify unique peaks that were exclusive to any source species; however, for most host species, at least one T-RFLP peak was identified to be more commonly found in that species, and a combination of peaks could be used to identify the source. T-RFLP profiles obtained from water spiked with known-source feces contained the expected diagnostic peaks from the source. These results indicate that the approach of identifying Bacteroides-Prevotella molecular markers associated with host species might be useful in identifying sources of fecal contamination in the environment.
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