Evidence map›Paper›PMID 16204483›Full record

ArticleApplied and environmental microbiology2005

Metabolic engineering of the purine pathway for riboflavin production in Ashbya gossypii.

Alberto Jiménez, María A Santos, Markus Pompejus, José L Revuelta

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 134 citations in OpenAlex.

  1. Review
  2. Scarless Genetic Engineering ofJournal of microbiology and biotechnology · 2025
    Article
  3. Review
  4. Article
  5. Article
  6. Regulatory Functions of PurR inMicroorganisms · 2023
    Article
  7. Metabolic Engineering ofMicroorganisms · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. New Promoters for Metabolic Engineering ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  13. Effects of sirtuins on the riboflavin production in Ashbya gossypii.Applied microbiology and biotechnology · 2021
    Article
  14. Sugar transport for enhanced xylose utilization in Ashbya gossypii.Journal of industrial microbiology & biotechnology · 2020
    Article
  15. Genomic Edition ofBio-protocol · 2020
    Article
  16. Article
  17. Review
  18. Production of Vitamin B2 (Riboflavin) by Microorganisms: An Overview.Frontiers in bioengineering and biotechnology · 2020
    Review
  19. Article
  20. Metabolic flux analysis in Ashbya gossypii usingMicrobial cell factories · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Alberto JiménezDepartamento de Microbiología y Genética, CSIC/Universidad de Salamanca, Campus Miguel de Unamuno, 37007 Salamanca, Spain.
María A Santos
Markus Pompejus
José L Revuelta
Universidad de Salamanca · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purine nucleotides are essential precursors for living organisms because they are involved in many important processes, such as nucleic acid synthesis, energy supply, and the biosynthesis of several amino acids and vitamins such as riboflavin. GTP is the immediate precursor for riboflavin biosynthesis, and its formation through the purine pathway is subject to several regulatory mechanisms in different steps. Extracellular purines repress the transcription of most genes required for de novo ATP and GTP synthesis. Additionally, three enzymes of the pathway, phosphoribosyl pyrophosphate (PRPP) amidotransferase, adenylosuccinate synthetase, and IMP dehydrogenase, are subject to feedback inhibition by their end products. Here we report the characterization and manipulation of the committed step in the purine pathway of the riboflavin overproducer Ashbya gossypii. We report that phosphoribosylamine biosynthesis in A. gossypii is negatively regulated at the transcriptional level by extracellular adenine. Furthermore, we show that ATP and GTP exert a strong inhibitory effect on the PRPP amidotransferase from A. gossypii. We constitutively overexpressed the AgADE4 gene encoding PRPP amidotransferase in A. gossypii, thereby abolishing the adenine-mediated transcriptional repression. In addition, we replaced the corresponding residues (aspartic acid310, lysine333, and alanine417) that have been described to be important for PRPP amidotransferase feedback inhibition in other organisms by site-directed mutagenesis. With these manipulations, we managed to enhance metabolic flow through the purine pathway and to increase the production of riboflavin in the triple mutant strain 10-fold (228 mg/liter).

Indexed as

Gene Expression Regulation, FungalAdenineAmidophosphoribosyltransferaseBase SequenceFungal ProteinsGenetic EngineeringMolecular Sequence DataMutagenesis, Site-DirectedPhosphoribosyl PyrophosphatePurinesRiboflavinSaccharomycetalesSequence Analysis, DNAAdenineAmidophosphoribosyltransferaseFungal ProteinsPhosphoribosyl PyrophosphatepurinePurinesRiboflavin

Identifiers

PMID16204483
PMCPMC1265981
OpenAlexW2120076772

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.