Evidence map›Paper›PMID 16204211›Full record

ArticleGenetics2006

Pleiotropic effects of the duplicate maize FLORICAULA/LEAFY genes zfl1 and zfl2 on traits under selection during maize domestication.

Kirsten Bomblies, John F Doebley

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 131 citations in OpenAlex.

  1. Article
  2. Article
  3. Determination of single or paired-kernel-rows is controlled by two quantitative loci during maize domestication.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  4. Review
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  10. Molecular genetic variation of animals and plants under domestication.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Review
  11. Deciphering Pleiotropic Signatures of Regulatory SNPs inInternational journal of molecular sciences · 2022
    Article
  12. Article
  13. Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Kirsten BombliesDepartment of Genetics, University of Wisconsin, Madison, Wisconsin, 53706, USA. kbomblies@gmail.com
John F Doebley
University of Wisconsin–Madison · US

Funding

MOLECULAR GENETICS OF VARIATION FOR COMPLEX TRAITSR01GM058816 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI DOEBLEY, JOHN F · 1999 to 2007
$1.6M
NIGMS NIH HHS GM58816NIGMS NIH HHS R01 GM058816
6 · The paper itself

Abstract

Phenotypic variation on which selection can act during evolution may be caused by variation in activity level of developmental regulatory genes. In many cases, however, such genes affect multiple traits. This situation can lead to co-evolution of traits, or evolutionary constraint if some pleiotropic effects are detrimental. Here, we present an analysis of quantitative traits associated with gene copy number of two important maize regulatory genes, the duplicate FLORICAULA/LEAFY orthologs zfl1 and zfl2. We found statistically significant associations between several quantitative traits and copy number of both zfl genes in several maize genetic backgrounds. Despite overlap in traits associated with these duplicate genes, zfl1 showed stronger associations with flowering time, while zfl2 associated more strongly with branching and inflorescence structure traits, suggesting some divergence of function. Since zfl2 associates with quantitative variation for ear rank and also maps near a quantitative trait locus (QTL) on chromosome 2 controlling ear rank differences between maize and teosinte, we tested whether zfl2 might have been involved in the evolution of this trait using a QTL complementation test. The results suggest that zfl2 activity is important for the QTL effect, supporting zfl2 as a candidate gene for a role in morphological evolution of maize.

Indexed as

Biological EvolutionGene Expression Regulation, DevelopmentalQuantitative Trait LociSelection, GeneticChromosome MappingChromosomes, PlantDNA, PlantFlowersGene DosageGenes, DevelopmentalGenetic Complementation TestGenetic VariationGenotypePhenotypePlant ProteinsZea maysDNA, PlantPlant Proteins

Identifiers

PMID16204211
PMCPMC1456179
OpenAlexW2124604488

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.