Evidence map›Paper›PMID 16196383›Full record

ArticleBrain pathology (Zurich, Switzerland)2005

Targeted gene expression analysis in hemimegalencephaly: activation of beta-catenin signaling.

Jia Yu, Marianna Baybis, Allana Lee, Guy McKhann, Diane Chugani, William J Kupsky, Eleonora Aronica, Peter B Crino

Open access · greenAbstract read
In one paragraph

Article in Brain pathology (Zurich, Switzerland), 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Epilepsy related to developmental tumors and malformations of cortical development.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2014
    Review
  5. Article
  6. Malformations of cortical development.Brain pathology (Zurich, Switzerland) · 2012
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Jia YuPENN Epilepsy Center, Department of Neurology, University of Pennsylvania Medical Center, Philadelphia 19104, USA.
Marianna Baybis
Allana Lee
Guy McKhann
Diane Chugani
William J Kupsky
Eleonora Aronica
Peter B Crino
University of Amsterdam · NL

Funding

GENE EXPRESSION AND CLONALITY IN DYSPLASTIC CORTICAL NEUR21NS039938 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI CRINO, PETER B · 2000 to 2002
$464k
NINDS NIH HHS R21-NS39938
6 · The paper itself

Abstract

Hemimegalencephaly (HMEG) is a developmental brain malformation characterized by unilateral hemispheric enlargement, cytoarchitectural abnormalities, and an association with epilepsy. To define the developmental pathogenesis of HMEG, the expression of 200 cell signaling, growth, angiogenic, and transcription factor genes was assayed in HMEG samples (n=8) with targeted cDNA arrays. Differential expression of 31 mRNAs across the 4 gene families was identified in HMEG compared with control cortex. Increases in growth and transcription factor genes included JNK-1, cyclic AMP response element binding protein (CREB), and tuberin mRNAs and decreases included insulin-like growth factor-1 (IGF-1), transforming growth factor beta-3 (TGF-beta3), and NFkB mRNAs. Increased expression of cyclin D1, c-myc, and WISP-1 mRNAs in HMEG suggested activation of the Wnt-1/beta-catenin cascade. Western analysis demonstrated increased levels of non-phosphorylated beta-catenin, which transcriptionally activates cyclin D7 and c-myc genes, but reduced levels of Ser33/Ser37/Thr41 phospho-beta-catenin, which is essential for beta-catenin-inactivation, in HMEG. Altered expression of 31 mRNAs from 4 gene families in human HMEG may lead to aberrant cell growth and hemispheric enlargement during brain development. Enhanced cyclin D1 and c-myc transcription likely reflects increased transcriptionally active beta-catenin due to decreased Ser33/Ser37/Thr41 phospho-beta-catenin and suggests activation of the Wnt-1/beta-catenin cascade in HMEG.

Indexed as

Gene ExpressionAdolescentBase Sequencebeta CateninBlotting, WesternBrainBrain DiseasesChildChild, PreschoolCytoskeletal ProteinsEpilepsyFemaleGene Expression ProfilingHumansInfantInfant, Newbornbeta CateninCTNNB1 protein, humanCytoskeletal ProteinsTrans-Activators

Identifiers

PMID16196383
PMCPMC8095959
OpenAlexW1965849388

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.