Evidence map›Paper›PMID 16189668›Full record

ArticleImmunogenetics2005

Development of dense microsatellite markers in the entire SLA region and evaluation of their polymorphisms in porcine breeds.

Maiko Tanaka, Asako Ando, Christine Renard, Patrick Chardon, Michiko Domukai, Naohiko Okumura, Takashi Awata, Hirohide Uenishi

Abstract read
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Article in Immunogenetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Maiko TanakaSecond Research Division, STAFF-Institute, 446-1 Ippaizuka, Kamiyokoba, Tsukuba, Ibaraki, 305-0854, Japan.
Asako Ando
Christine Renard
Patrick Chardon
Michiko Domukai
Naohiko Okumura
Takashi Awata
Hirohide Uenishi

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We developed 40 microsatellite markers in the entire swine leukocyte antigen (SLA) region, spanning over 2.35 Mb. The average span between markers was 59 kb, and the largest interval between markers was 127 kb. We also evaluated polymorphisms of length for the markers using 97 pigs derived from 12 breeds, including representative commercial breeds. All of the markers were successfully amplified in genomic DNA and shown to be polymorphic. These markers will provide an alternative method for determining the SLA haplotypes instead of direct typing of SLA genes per se. They will be valuable for transplantation studies and for association studies between immunological traits such as disease susceptibility and tumor rejection.

Indexed as

Microsatellite RepeatsPolymorphism, GeneticAnimalsBreedingDNA PrimersHistocompatibility Antigens Class IHistocompatibility Antigens Class IISwineDNA PrimersHistocompatibility Antigens Class IHistocompatibility Antigens Class IIswine leukocyte antigen

Identifiers

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.