Evidence map›Paper›PMID 16188035›Full record

ArticleRetrovirology2005

Mutations affecting cleavage at the p10-capsid protease cleavage site block Rous sarcoma virus replication.

Marcy L Vana, Aiping Chen, Peter Boross, Irene Weber, Dalbinder Colman, Eric Barklis, Jonathan Leis

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 85% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Marcy L VanaDepartment of Microbiology and Immunology, Feinberg School of Medicine, Northwestern University, Chicago, Illinois 60611, USA. mvana@stanford.edu
Aiping Chen
Peter Boross
Irene Weber
Dalbinder Colman
Eric Barklis
Jonathan Leis
Northwestern University · USGeorgia State University · USOregon Health & Science University · USVollum Institute · US

Funding

In Vitro Analysis of HIV Gag Protein InteractionsR01GM060170 · NIGMS · OREGON HEALTH & SCIENCE UNIVERSITY · PI BARKLIS, ERIC W · 1999 to 2019
$5.9M
ACTIVITY OF RESISTANT VARIANTS OF HIV PROTEASER01GM062920 · NIGMS · GEORGIA STATE UNIVERSITY · PI WEBER, IRENE T · 2000 to 2012
$3.3M
STRUCTURE/FUNCTION COMPARISONS OF THE HIV-1 AND RSV PRSR01CA052047 · NCI · NORTHWESTERN UNIVERSITY · PI LEIS, JONATHAN P · 1992 to 2005
$1.5M
MOLECULAR BASIS FOR SPECIFICITY OF RETROVIRAL PROTEASESR01CA058166 · NCI · THOMAS JEFFERSON UNIVERSITY · PI WEBER, IRENE T · 1993 to 1995
–
NCI NIH HHS CA52047NCI NIH HHS CA58166NCI NIH HHS R01 CA052047NIGMS NIH HHS GM60170NIGMS NIH HHS R01 GM060170NIGMS NIH HHS R01 GM062920
6 · The paper itself

Abstract

A series of amino acid substitutions (M239F, M239G, P240F, V241G) were placed in the p10-CA protease cleavage site (VVAM*PVVI) to change the rate of cleavage of the junction. The effects of these substitutions on p10-CA cleavage by RSV PR were confirmed by measuring the kinetics of cleavage of model peptide substrates containing the wild type and mutant p10-CA sites. The effects of these substitutions on processing of the Gag polyprotein were determined by labeling Gag transfected COS-1 cells with 35S-Met and -Cys, and immunoprecipitation of Gag and its cleavage products from the media and lysate fractions. All substitutions except M239F caused decreases in detectable Gag processing and subsequent release from cells. Several of the mutants also caused defects in production of the three CA proteins. The p10-CA mutations were subcloned into an RSV proviral vector (RCAN) and introduced into a chick embryo fibroblast cell line (DF-1). All of the mutations except M239F blocked RSV replication. In addition, the effects of the M239F and M239G substitutions on the morphology of released virus particles were examined by electron microscopy. While the M239F particles appeared similar to wild type particles, M239G particles contained cores that were large and misshapen. These results suggest that mutations affecting cleavage at the p10-CA protease cleavage site block RSV replication and can have a negative impact on virus particle morphology.

Indexed as

AnimalsAspartic Acid EndopeptidasesAvian Sarcoma VirusesCapsid ProteinsChlorocebus aethiopsCOS CellsGene Products, gagMutationStructure-Activity RelationshipVirionVirus AssemblyVirus ReplicationAspartic Acid EndopeptidasesCapsid ProteinsGene Products, gagRous sarcoma virus protease

Identifiers

PMID16188035
PMCPMC1262776
OpenAlexW2142992734

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.