Evidence map›Paper›PMID 16187154›Full record

ArticleCurrent microbiology2005

Genetic diversity on 16S rDNA sequence and phylogenic tree analysis in Pasteurella pneumotropica strains isolated from laboratory animals.

Nobuhito Hayashimoto, Akira Takakura, Toshio Itoh

Abstract read
PubMed Publisher
In one paragraph

Article in Current microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Why Is the Current Monitoring of Rodentibacter spp. Exclusively by Molecular Methods Insufficient?Journal of the American Association for Laboratory Animal Science : JAALAS · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Sequestration of CO2 by halotolerant algae.Journal of environmental health science & engineering · 2014
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Nobuhito HayashimotoICLAS Monitoring Center, Central Institute for Experimental Animals, Miyamae-ku, Kawasaki-shi, Japan. nubuh@ciea.or.jp
Akira Takakura
Toshio Itoh

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To reveal the genetic diversity of Pasteurella pneumotropica, the 16S rDNA sequence and multiple alignments were performed for 35 strains (from 17 mice, 13 rats, 3 hamsters, 1 rabbit, and 1 guinea pig) identified as P. pneumotropica using a commercial biochemical test kit or PCR test and two reference strains (ATCC 35149 and CNP160). Each strain showed a close similarity with one of the following organisms: P. pneumotropica (M75083), Bisgaard taxon22 (AY172726), Pasteurella sp. MCCM00235 (AF224300), Pasteurellaceae gen. sp. Forsyth A3 (AF224301), and Actinobacillus muris (AF024526) on GenBank, and were divided into six clusters on a phylogenic tree. Two reference strains, P. pneumotropica biotype Jawetz and Heyl, were classified at both ends of the clusters. Our conclusion is that P. pneumotropica should be reclassified because of the very wide genetic diversity that exists.

Indexed as

Genetic VariationAnimalsAnimals, LaboratoryCricetinaeDNA, BacterialDNA, RibosomalGuinea PigsMiceMolecular Sequence DataPasteurellaPhylogenyRabbitsRatsRNA, Ribosomal, 16SSequence AnalysisDNA, BacterialDNA, RibosomalRNA, Ribosomal, 16S

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.