Evidence map›Paper›PMID 16186806›Full record

ArticleOncogene2006

Genomic amplification of MET with boundaries within fragile site FRA7G and upregulation of MET pathways in esophageal adenocarcinoma.

C T Miller, L Lin, A M Casper, J Lim, D G Thomas, M B Orringer, A C Chang, A F Chambers, T J Giordano, T W Glover and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 1 pooled it
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 1 synthesis or guideline pooled it, 160 citations in OpenAlex.

  1. Pooled it
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  5. Article
  6. An Observatory for theCancers · 2023
    Review
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8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

C T MillerDepartment of Surgery, University of Michigan Medical School, Ann Arbor, MI 48109, USA.
L Lin
A M Casper
J Lim
D G Thomas
M B Orringer
A C Chang
A F Chambers
T J Giordano
T W Glover
D G Beer
University of Michigan–Ann Arbor · USCancer Care Ontario · CA

Funding

MOLECULAR STUDIES OF ESOPHAGEAL ADENOCARCINOMAR01CA071606 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BEER, DAVID GEORGE · 1997 to 2009
$3.1M
ROLE OF FRAGILE SITES IN CHROMOSOME BREAKAGE AND CANCERR01CA043222 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GLOVER, THOMAS W · 1986 to 2008
$2.5M
NCI NIH HHS CA43222NCI NIH HHS CA71606
6 · The paper itself

Abstract

Esophageal adenocarcinoma (EA) is characterized by a poor prognosis making the identification of clinically targetable proteins essential for improving patient outcome. We report the involvement of multiple alterations of the MET pathway in EA development and progression. Microarray analysis of Barrett's metaplasia, dysplasia, and EA revealed overexpression of the MET oncogene in EAs but only those with MET gene amplification. STS-amplification mapping revealed that the boundary of the MET amplicon in these EAs is defined by fragile site FRA7G. We also identified an amplicon at 11p13 that resulted in amplification and overexpression of CD44, a gene involved in MET autophosphorylation upon HGF stimulation. Tissue microarrays with phospho-MET-specific antibodies demonstrated a uniformly high abundance of MET activation in primary EA and cells metastatic to lymph nodes but to a lesser extent in a subset of metaplastic and dysplastic Barrett's samples. Increased expression of multiple genes in the MET pathway associated with invasive growth, for example, many MMPs and osteopontin, also was found in EAs. Treatment of EA-derived cell lines with geldanamycin, an inhibitor for tyrosine kinases including MET receptor kinase, reduced cell migration and induced EA cell apoptosis. The data indicate that upregulation of the MET pathway may contribute to the poor outcome of EA patients and that therapeutic agents targeting this pathway may help improve patient survival.

Indexed as

Chromosome Fragile SitesGene AmplificationUp-RegulationAdenocarcinomaBlotting, WesternEsophageal NeoplasmsHumansImmunoprecipitationOligonucleotide Array Sequence AnalysisProto-Oncogene ProteinsProto-Oncogene Proteins c-metReceptors, Growth FactorRNA, MessengerMET protein, humanProto-Oncogene ProteinsProto-Oncogene Proteins c-metReceptors, Growth FactorRNA, Messenger

Identifiers

PMID16186806
OpenAlexW2143219084

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.