Evidence map›Paper›PMID 16181493›Full record

ArticleBMC plant biology2005

Purification and kinetic studies of recombinant gibberellin dioxygenases.

Diane R Lester, Andy Phillips, Peter Hedden, Inger Andersson

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Diane R LesterInstitute for Cell and Molecular Biology, Uppsala University, 751 24 Uppsala, Sweden. diane@xray.bmc.uu.se
Andy Phillips
Peter Hedden
Inger Andersson
Rothamsted Research · GBSwedish University of Agricultural Sciences · SEUppsala University · SE

Funding

Biotechnology and Biological Sciences Research Council BBS/E/C/00004161
6 · The paper itself

Abstract

backgroundThe 2-oxoglutarate-dependent dioxygenases (2ODDs) of gibberellin (GA) biosynthesis have a key role in the metabolism of a major plant hormone. The activity of recombinant GA 2ODDs from many species has been characterised in detail, however little information relates to enzyme purification. Native GA 2ODDs displayed lability during purification.

resultsTwo GA 2ODDs were expressed in Escherichia coli and purified to homogeneity. The GA 2-oxidase from Pisum sativum L., PsGA2OX1, was expressed as a glutathione s-transferase (GST) fusion. It was purified in the three steps of affinity chromatography, GST removal and gel filtration. Highly pure PsGA2OX1 was obtained at a yield of 0.3 mg/g of cells. It displayed a Km of 0.024 microM and a Vmax of 4.4 pkat/mg toward [1beta,2beta,3beta-3H3]GA20. The GA 3-oxidase from Arabidopsis thaliana, AtGA3OX4, was expressed as a poly(His)-tagged thioredoxin fusion. It was purified by Immobilised Metal Affinity Chromatography followed by gel filtration. Cleavage of the fusion took place between the two purification steps. Highly pure AtGA3OX4 was obtained at a yield of 0.01 mg/g of cells. It displayed a Km of 0.82 microM and Vmax of 52,500 pkat/mg toward [1beta,2beta,3beta-3H3]GA20.

conclusionFusion tags were required to stabilise and solubilise PsGA2OX1 and AtGA3OX4 during E. coli expression. The successful purification of milligram quantities of PsGA2OX1 enables mechanistic and structural studies not previously possible on GA 2ODDs. A moderate yield of pure AtGA3OX4 requires the further optimisation of the latter stages of the enzyme purification schedule. PsGA2OX1's action in planta as deduced from the effect of the null mutation sln on GA levels in seeds is in agreement with the kinetic parameters of the recombinant enzyme.

Indexed as

ArabidopsisChromatography, AffinityChromatography, GelEscherichia coliGlutathione TransferaseKineticsMixed Function OxygenasesPisum sativumRecombinant Fusion ProteinsThioredoxinsgibberellin 2-dioxygenasegibberellin 3beta-hydroxylaseGlutathione TransferaseMixed Function OxygenasesRecombinant Fusion ProteinsThioredoxins

Identifiers

PMID16181493
PMCPMC1262730
OpenAlexW2157723938

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.