Evidence map›Paper›PMID 16177910›Full record

ArticlePlanta2006

Cytosolic calcium is involved in the regulation of barley hemoglobin gene expression.

Xianzhou Nie, Douglas C Durnin, Abir U Igamberdiev, Robert D Hill

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. Tolerant mechanisms to OJournal of plant research · 2020
    Article
  4. Article
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Xianzhou NieDepartment of Plant Science, University of Manitoba, R3T 2N2, MB, Winnipeg, Canada.
Douglas C Durnin
Abir U Igamberdiev
Robert D Hill
University of Manitoba · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hemoglobin gene expression is upregulated during hypoxia. To determine whether the induction occurs via similar mechanisms that have been proposed for other hypoxically induced proteins, barley (Hordeum vulgare L.) aleurone layers were treated with various agents that interfere with known components of signal transduction. Ruthenium red, an organelle calcium channel blocker, inhibited anoxia-induced hemoglobin (Hb) and alcohol dehydrogenase (EC 1.1.1.1) (Adh) gene expression in a dose-dependent manner. The divalent ionophore, A23187, combined with EGTA also dramatically reduced anoxia-induced Hb and Adh expression. Normal induction of Hb by anoxia in EGTA-treated cells was restored by adding exogenous Ca2+ but not Mg2+, suggesting that cytosolic calcium is involved in Hb and Adh regulation. W-7, a calmodulin antagonist, did not affect anaerobically induced Hb and Adh expression even though it induced Hb under aerobiosis. A3, a protein kinase inhibitor, did not significantly affect anaerobically induced Hb, but did significantly upregulate the gene under aerobic conditions. The results indicate that calmodulin-independent anaerobic alteration in cytosolic Ca2+ and protein dephosphorylation are factors in Hb induction.

Indexed as

Gene Expression Regulation, Plantalpha-AmylasesCalcimycinCalciumCalcium-Calmodulin-Dependent Protein KinasesCytosolEgtazic AcidGibberellinsHemoglobinsHordeumNuclear ProteinsPhosphorylationPlant ProteinsProtein Kinase InhibitorsRuthenium RedSignal Transductionalpha-AmylasesCalcimycinCalciumCalcium-Calmodulin-Dependent Protein KinasesEgtazic Acidgibberellic acidGibberellinsHemoglobinsNuclear ProteinsPlant ProteinsProtein Kinase InhibitorsRuthenium RedSulfonamidesW 7

Identifiers

PMID16177910
OpenAlexW2046823635

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.