ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2005
Delimitation of the rice wide compatibility gene S5 ( n ) to a 40-kb DNA fragment.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
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Who cites it
18 citing papers in PubMed, 62 citations in OpenAlex.
- Molecular-Marker-Based Design for Breeding Indica-Japonica Hybrid Rice with Bacterial Blight Resistance.Genes · 2025Article
- Genetic characterization and fine mapping ofMolecular breeding : new strategies in plant improvement · 2022Article
- Development of Wide-CompatibleFrontiers in plant science · 2022Article
- The Next Generation of Rice: Inter-SubspecificFrontiers in plant science · 2022Article
- Genetic Analysis of S5-Interacting Genes Regulating Hybrid Sterility in Rice.Rice (New York, N.Y.) · 2021Article
- The Gametic Non-Lethal GeneBiology · 2019Article
- Processes Underlying a Reproductive Barrier inPlant physiology · 2017Article
- A walk on the wild side: Oryza species as source for rice abiotic stress tolerance.Genetics and molecular biology · 2017Article
- Molecular basis underlying the S5-dependent reproductive isolation and compatibility of indica/japonica rice hybrids.Plant physiology · 2012Article
- A major locus qS12, located in a duplicated segment of chromosome 12, causes spikelet sterility in an indica-japonica rice hybrid.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Fine mapping and marker development for the crossability gene SKr on chromosome 5BS of hexaploid wheat (Triticum aestivum L.).Genetics · 2009Article
- The evolution of sex-independent transmission ratio distortion involving multiple allelic interactions at a single locus in rice.Genetics · 2008Article
- A triallelic system of S5 is a major regulator of the reproductive barrier and compatibility of indica-japonica hybrids in rice.Proceedings of the National Academy of Sciences of the United States of America · 2008Article
- Identification and fine mapping of S-d, a new locus conferring the partial pollen sterility of intersubspecific F1 hybrids in rice (Oryza sativa L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2008Article
- Fine mapping of S31, a gene responsible for hybrid embryo-sac abortion in rice (Oryza sativa L.).Planta · 2007Article
- Predicting the size of the progeny mapping population required to positionally clone a gene.Genetics · 2007Article
- Fine mapping and allelic dosage effect of Hwc1, a complementary hybrid weakness gene in rice.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2007Article
- Fine mapping of f5-Du, a gene conferring wide-compatibility for pollen fertility in inter-subspecific hybrids of rice (Oryza sativa L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2006Article
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Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Wide compatibility varieties (WCVs) are a special class of rice (Oryza sativa L.) germplasm that produces hybrids with normal pollen and spikelet fertility when crossed with both indica and japonica subspecies. The wide compatibility gene S5 ( n ) has been used extensively in inter-subspecific hybrid breeding programs. We previously mapped the S5 locus to a 2.2-cM genomic region between RM253 and R2349 on chromosome 6, using a population of 356 F(1) plants derived from the three-way cross 02428/Nanjing11//Balilla. In this study, a chromosome walking strategy was employed to construct a physical map covering this genomic region using these two closest markers as the starting points. A physical map consisting of six overlapping BAC clones was formed, spanning a genomic region of 540-kb in length. By analyzing recombination events from a population of 8,000 F(1) plants derived from a three-way cross based on near isogenic lines of the S5 locus, the S5 locus was localized to a DNA fragment of 40-kb in length, flanked by two shotgun subclones, 7B1 and 15D2. Sequence analysis of this fragment predicted five open reading frames, encoding xyloglucan fucosyltransferases, dnak-type molecular chaperone BiP, a putative eukaryotic aspartyl protease, and a hypothetical protein. This result will be very useful in molecular cloning of the S5 ( n ) allele and marker-assisted transferring of the wide compatibility gene in rice breeding programs.
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