Evidence map›Paper›PMID 16177332›Full record

ArticleInfection and immunity2005

Legionella pneumophila NudA Is a Nudix hydrolase and virulence factor.

Paul H Edelstein, Baofeng Hu, Takashi Shinzato, Martha A C Edelstein, Wenlian Xu, Maurice J Bessman

Open access · greenAbstract read
In one paragraph

Article in Infection and immunity, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 27 citations in OpenAlex.

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  9. Insights into the Genome Sequence ofInternational journal of genomics · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Paul H EdelsteinDepartment of Pathology and Laboratory Medicine, University of Pennsylvania School of Medicine, Philadelphia, 19104-4283, USA. phe@mail.med.upenn.edu
Baofeng Hu
Takashi Shinzato
Martha A C Edelstein
Wenlian Xu
Maurice J Bessman
University of Pennsylvania · USJohns Hopkins University · USUniversity of the Ryukyus · JP

Funding

ENZYMATIC SYNTHESIS OF NUCLEOTIDES AND DNAR01GM018649 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI BESSMAN, MAURICE J · 1985 to 2006
$2.3M
COMPACT STRUCTURE IN A DENATURED PROTEINF32GM018649 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI SINCLAIR, JAMES F · 1997 to 1998
–
NIGMS NIH HHS F32 GM018649NIGMS NIH HHS GM18649NIGMS NIH HHS R01 GM018649
6 · The paper itself

Abstract

We studied the identity and function of the 528-bp gene immediately upstream of Legionella pneumophila F2310 ptsP (enzyme I(Ntr)). This gene, nudA, encoded for a Nudix hydrolase based on the inferred protein sequence. NudA had hydrolytic activity typical of other Nudix hydrolases, such as Escherichia coli YgdP, in that Ap(n)A's, in particular diadenosine pentaphosphate (Ap(5)A), were the preferred substrates. NudA hydrolyzed Ap(5)A to ATP plus ADP. Both ptsP and nudA were cotranscribed. Bacterial two-hybrid analysis showed no PtsP-NudA interactions. Gene nudA was present in 19 of 20 different L. pneumophila strains tested and in 5 of 10 different Legionella spp. other than L. pneumophila. An in-frame nudA mutation was made in L. pneumophila F2310 to determine the phenotype. The nudA mutant was an auxotroph that grew slowly in liquid and on solid media and had a smaller colony size than its parent. In addition, the mutant was more salt resistant than its parent and grew very poorly at 25 degrees C; all of these characteristics, as well as auxotrophy and slow-growth rate, were reversed by transcomplementation with nudA. The nudA mutant was outcompeted by about fourfold by the parent in competition studies in macrophages; transcomplementation almost completely restored this defect. Competition studies in guinea pigs with L. pneumophila pneumonia showed that the nudA mutant was outcompeted by its parent in both lung and spleen. NudA is of major importance for resisting stress in L. pneumophila and is a virulence factor.

Indexed as

Amino Acid SequenceAnimalsBacterial ProteinsBase SequenceGuinea PigsLegionella pneumophilaLegionnaires' DiseaseMacrophages, AlveolarMaleMolecular Sequence DataMutationNudix HydrolasesOperonPhenotypePhosphoenolpyruvate Sugar Phosphotransferase SystemPhosphotransferases (Nitrogenous Group Acceptor)Bacterial ProteinsNudix Hydrolasesphosphoenolpyruvate-protein phosphotransferasePhosphoenolpyruvate Sugar Phosphotransferase SystemPhosphotransferases (Nitrogenous Group Acceptor)PyrophosphatasesVirulence Factors

Identifiers

PMID16177332
PMCPMC1230914
OpenAlexW2129810247

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.