Evidence map›Paper›PMID 16170239›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2005

Phenotypic consequences of genetic variation at hemizygous alleles: Sotos syndrome is a contiguous gene syndrome incorporating coagulation factor twelve (FXII) deficiency.

Naohiro Kurotaki, Joseph J Shen, Mayumi Touyama, Tatsuro Kondoh, Remco Visser, Takao Ozaki, Junji Nishimoto, Takashi Shiihara, Kimiaki Uetake, Yoshio Makita and 6 more

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Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Copy number variation (CNV) in theArchives animal breeding · 2019
    Article
  6. Article
  7. Non-coding genetic variants in human disease.Human molecular genetics · 2015
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Generation of the Sotos syndrome deletion in mice.Mammalian genome : official journal of the International Mammalian Genome Society · 2012
    Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Naohiro KurotakiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas 77030, USA.
Joseph J Shen
Mayumi Touyama
Tatsuro Kondoh
Remco Visser
Takao Ozaki
Junji Nishimoto
Takashi Shiihara
Kimiaki Uetake
Yoshio Makita
Naoki Harada
Salmo Raskin
Chester W Brown
Pia Höglund
Nobuhiko Okamoto
James R Lupski

Funding

UNDERSTANDING FXTAS AMONG MALES WITH THE FMR1 PREMUTATIONP30HD024064 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI WESTBROOK, THOMAS · 1988 to 2013
$29.4M
REPLICATING A PEER INTERVENTION IN A MULTI-CULTURAL CITYR01HD038420 · NICHD · UNIVERSITY OF WASHINGTON · PI MORRISON, DIANE M. · 1999 to 2003
$2.7M
CMT Peripheral Neuropathy: IV. Genes and PathogenesisR01NS027042 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI LUPSKI, JAMES R. · 1990 to 2005
$2.7M
NICHD NIH HHS HD 2406407NICHD NIH HHS P01 HD38420NINDS NIH HHS R01NS27042
6 · The paper itself

Abstract

purposeWe tested the hypothesis that Sotos syndrome (SoS) due to the common deletion is a contiguous gene syndrome incorporating plasma coagulation factor twelve (FXII) deficiency. The relationship between FXII activity and the genotype at a functional polymorphism of the FXII gene was investigated.

methodsA total of 21 patients including those with the common deletion, smaller deletions, and point mutations, and four control individuals were analyzed. We examined FXII activity in patients and controls, and analyzed their FXII 46C/T genotype using direct DNA sequencing.

resultsAmong 10 common deletion patients, seven patients had lower FXII activity with the 46T allele of the FXII gene, whereas three patients had normal FXII activity with the 46C allele. Two patients with smaller deletions, whose FXII gene is not deleted had low FXII activity, but one patient with a smaller deletion had normal FXII. Four point mutation patients and controls all had FXII activities within the normal range.

conclusionFXII activity in SoS patients with the common deletion is predominantly determined by the functional polymorphism of the remaining hemizygous FXII allele. Thus, Sotos syndrome is a contiguous gene syndrome incorporating coagulation factor twelve (FXII) deficiency.

Indexed as

PhenotypeAdolescentAdultChildChild, PreschoolChromosome DeletionFactor XIIFactor XII DeficiencyFemaleGenetic VariationHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHumansInfantIn Situ HybridizationIntracellular Signaling Peptides and ProteinsFactor XIIHistone-Lysine N-MethyltransferaseHistone MethyltransferasesIntracellular Signaling Peptides and ProteinsNSD1 protein, humanNuclear Proteins

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.