Evidence map›Paper›PMID 16167084›Full record

ArticleThe Journal of clinical investigation2005

An interstitial deletion-insertion involving chromosomes 2p25.3 and Xq27.1, near SOX3, causes X-linked recessive hypoparathyroidism.

Michael R Bowl, M Andrew Nesbit, Brian Harding, Elaine Levy, Andrew Jefferson, Emanuela Volpi, Karine Rizzoti, Robin Lovell-Badge, David Schlessinger, Michael P Whyte and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 153 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. A novel mutation in exon 18 ofThe Journal of international medical research · 2026
    Article
  5. Article
  6. Article
  7. Hypoparathyroidism in children and adolescents.Annals of pediatric endocrinology & metabolism · 2023
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Hypoparathyroidism.The Journal of clinical endocrinology and metabolism · 2020
    Review
  15. Article
  16. Genetic Disorders of Parathyroid Development and Function.Endocrinology and metabolism clinics of North America · 2018
    Review
  17. Review
  18. Article
  19. Exome Sequencing Reveals Mutations in AIRE as a Cause of Isolated Hypoparathyroidism.The Journal of clinical endocrinology and metabolism · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 3 countries.

Michael R BowlAcademic Endocrine Unit, Nuffield Department of Medicine, University of Oxford, Oxford Centre for Diabetes, Endocrinology and Metabolism (OCDEM), Churchill Hospital, Oxford, United Kingdom.
M Andrew Nesbit
Brian Harding
Elaine Levy
Andrew Jefferson
Emanuela Volpi
Karine Rizzoti
Robin Lovell-Badge
David Schlessinger
Michael P Whyte
Rajesh V Thakker
Institut thématique Génétique, génomique et bioinformatique · FRLaboratory of Molecular Genetics · PLShriners Hospitals for Children - St. Louis · US

Funding

Genes Associated With Ovarian Development and Premature Ovarian Failure - testZIAAG000647 · NIA · NATIONAL INSTITUTE ON AGING · PI SCHLESSINGER, DAVID · 2009 to 2017
$6.2M
Translocations/genes in Premature Ovarian FailureZ01AG000647 · NIA · NATIONAL INSTITUTE ON AGING · PI SCHLESSINGER, DAVID · 1998 to 2008
$1.2M
Medical Research Council MC_U117562207Wellcome Trust
6 · The paper itself

Abstract

X-linked recessive hypoparathyroidism, due to parathyroid agenesis, has been mapped to a 906-kb region on Xq27 that contains 3 genes (ATP11C, U7snRNA, and SOX3), and analyses have not revealed mutations. We therefore characterized this region by combined analysis of single nucleotide polymorphisms and sequence-tagged sites. This identified a 23- to 25-kb deletion, which did not contain genes. However, DNA fiber-FISH and pulsed-field gel electrophoresis revealed an approximately 340-kb insertion that replaced the deleted fragment. Use of flow-sorted X chromosome-specific libraries and DNA sequence analyses revealed that the telomeric and centromeric breakpoints on X were, respectively, approximately 67 kb downstream of SOX3 and within a repetitive sequence. Use of a monochromosomal somatic cell hybrid panel and metaphase-FISH mapping demonstrated that the insertion originated from 2p25 and contained a segment of the SNTG2 gene that lacked an open reading frame. However, the deletion-insertion [del(X)(q27.1) inv ins (X;2)(q27.1;p25.3)], which represents a novel abnormality causing hypoparathyroidism, could result in a position effect on SOX3 expression. Indeed, SOX3 expression was demonstrated, by in situ hybridization, in the developing parathyroid tissue of mouse embryos between 10.5 and 15.5 days post coitum. Thus, our results indicate a likely new role for SOX3 in the embryonic development of the parathyroid glands.

Indexed as

AnimalsBase SequenceChromosome InversionChromosomes, Human, Pair 2Chromosomes, Human, XDNA-Binding ProteinsDNA Mutational AnalysisFemaleGene Expression Regulation, DevelopmentalGenes, RecessiveGenetic Diseases, X-LinkedHigh Mobility Group ProteinsHumansHypoparathyroidismIn Situ Hybridization, FluorescenceMaleDNA-Binding ProteinsHigh Mobility Group ProteinsSOX3 protein, humanSox3 protein, mouseSOXB1 Transcription FactorsTranscription Factors

Identifiers

PMID16167084
PMCPMC1201662
OpenAlexW2014798103

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.