Evidence map›Paper›PMID 16160911›Full record

ArticleJournal of clinical immunology2005

Expression of HLA-DP0401 molecules for identification of DP0401 restricted antigen specific T cells.

Junbao Yang, Laurel Huston, Deanna Berger, Nancy A Danke, Andrew W Liu, Mary L Disis, William W Kwok

Abstract read
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In one paragraph

Article in Journal of clinical immunology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Junbao YangBenaroya Research Institute at Virginia Mason, Seattle, WA, USA.
Laurel Huston
Deanna Berger
Nancy A Danke
Andrew W Liu
Mary L Disis
William W Kwok
Benaroya Research InstituteVirginia Mason Medical Center · USSeattle University · US

Funding

Immunologic Correlates of Immunization for CancerU54CA090818 · NCI · UNIVERSITY OF WASHINGTON · PI DISIS, MARY L. · 2001 to 2006
$5.5M
NCI NIH HHS U-54 CA090818
6 · The paper itself

Abstract

Human histocompatibility leukocyte antigen (HLA)-DPA1*0103/DPB1*0401 (DP0401) is the most common HLA class II molecule and is present in approximately 45% of the Caucasian population. In this study, soluble HLA-DP0401 molecules were expressed as "empty'' class II molecules in insect cells. Utilizing these soluble DP molecules and the Tetramer Guided Epitope Mapping (TGEM) approach, the influenza A Puerto Rico/8/34 matrix protein (MP) derived peptide MP(41-60) VLMEWLKTRPILSPLTKGIL and the Clostridium tetani Tetanus Toxin (TT) derived peptide TT(634-653) DKISDVSTIVPYIGPALNIV were identified as the DP0401 restricted MP and TT epitopes, respectively. In addition, T cells specific for the cancer testis antigen NY-ESO-1 and the breast/ovarian cancer over-expressing antigen Her-2/neu were detected in DP0401 subjects by DP0401 tetramers. The availability of HLA-DP0401 tetramers should facilitate the study of DP restricted T cell responses.

Indexed as

Amino Acid SequenceAnimalsAntigens, NeoplasmCancer VaccinesCD4-Positive T-LymphocytesCell LineDrosophilaEpitope MappingEpitopes, T-LymphocyteErb-b2 Receptor Tyrosine KinasesHLA-DP AntigensHLA-DP beta-ChainsHumansMolecular Sequence DataNeoplasm ProteinsPeptide FragmentsAntigens, NeoplasmCancer VaccinesEpitopes, T-LymphocyteErb-b2 Receptor Tyrosine KinasesHLA-DP AntigensHLA-DPB1*04:01 antigenHLA-DP beta-ChainsM1 protein, Influenza A virusNeoplasm ProteinsPeptide Fragmentspeptide NY-ESO-1 157-165Tetanus ToxinViral Matrix Proteins

Identifiers

PMID16160911
OpenAlexW2139449794

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.