Evidence map›Paper›PMID 16160143›Full record

ArticleJournal of virology2005

Temporal and anatomic relationship between virus replication and cytokine gene expression after vaginal simian immunodeficiency virus infection.

Kristina Abel, David M Rocke, Barinderpal Chohan, Linda Fritts, Christopher J Miller

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 119 citations in OpenAlex.

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  16. Resistance to type 1 interferons is a major determinant of HIV-1 transmission fitness.Proceedings of the National Academy of Sciences of the United States of America · 2017
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23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kristina AbelUC Davis, CCM/CNPRC, County Rd. 98/Hutchison Dr., Davis, CA 95616, USA. kabel@ucdavis.edu
David M Rocke
Barinderpal Chohan
Linda Fritts
Christopher J Miller
Oregon National Primate Research Center · US

Funding

ZONA PELLUCIDA PEPTIDES AS IMMUNOCONTRACEPTIVE ANTIGENSP51RR000169 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI HYDE, DALLAS MELVIN · 1985 to 2011
$126.2M
Pulmonary innate immune activation for bioterror defenseU01AI057264 · NIAID · COLEY PHARMACEUTICAL GROUP, INC. · PI KRIEG, ARTHUR M. · 2003 to 2005
$6.3M
Basic and Clinical Studies of CpG ODN in HIV DiseaseU19AI055793 · NIAID · RUSH UNIVERSITY MEDICAL CENTER · PI LANDAY, ALAN L · 2005 to 2006
$2.8M
DEVELOPMENT OF THE PRIMATE IMMUNOLOGY RESOURCER24RR014555 · NCRR · UNIVERSITY OF CALIFORNIA DAVIS · PI MILLER, CHRISTOPHER · 1999 to 2003
$2.7M
PROTECTIVE MECHANISMS WITH ATTENUATED LENTIVIRAL VACCINER01AI044480 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI MILLER, CHRISTOPHER · 1998 to 2002
$2.5M
Basic and Clinical Studies of CpG ODN in HIV DiseaseP01AI055793 · NIAID · RUSH UNIVERSITY MEDICAL CENTER · PI LANDAY, ALAN L · 2003 to 2004
$2.2M
Role of type I interferons in mucosal anti-SIV immunityR21DE016541 · NIDCR · UNIVERSITY OF CALIFORNIA DAVIS · PI ABEL, KRISTINA · 2004 to 2005
$413k
NCRR NIH HHS P51 RR000169NCRR NIH HHS R24 RR014555NCRR NIH HHS RR0169NCRR NIH HHS RR14555NCRR NIH HHS U51RR00169NIAID NIH HHS AI055793NIAID NIH HHS AI44480NIAID NIH HHS AI57264NIAID NIH HHS P01 AI055793NIAID NIH HHS U01 AI057264NIAID NIH HHS U19 AI055793NIDCR NIH HHS DE016541-01NIDCR NIH HHS R21 DE016541
6 · The paper itself

Abstract

The current knowledge about early innate immune responses at mucosal sites of human immunodeficiency virus (HIV) entry is limited but likely to be important in the design of effective HIV vaccines against heterosexual transmission. This study examined the temporal and anatomic relationship between virus replication, lymphocyte depletion, and cytokine gene expression levels in mucosal and lymphoid tissues in a vaginal-transmission model of HIV in rhesus macaques. The results of the study show that the kinetics of cytokine gene expression levels in the acute phase of infection are positively correlated with virus replication in a tissue. Thus, cytokine responses after vaginal simian immunodeficiency virus (SIV) inoculation are earliest and strongest in mucosal tissues of the genital tract and lowest in systemic lymphoid tissues. Importantly, the early cytokine response was dominated by the induction of proinflammatory cytokines, while the induction of cytokines with antiviral activity, alpha/beta interferon, occurred too late to prevent virus replication and dissemination. Thus, the early cytokine response favors immune activation, resulting in the recruitment of potential target cells for SIV. Further, unique cytokine gene expression patterns were observed in distinct anatomic locations with a rapid and persistent inflammatory response in the gut that is consistent with the gut being the major site of early CD4 T-cell depletion in SIV infection.

Indexed as

Gene ExpressionAnimalsCytokinesFemaleGene Expression ProfilingInterferon-alphaInterferon-betaKineticsLymphoid TissueMacaca mulattaMucous MembraneSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusVaginaVirus ReplicationCytokinesInterferon-alphaInterferon-beta

Identifiers

PMID16160143
PMCPMC1211549
OpenAlexW2095968013

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.