Evidence map›Paper›PMID 16155192›Full record

ArticleJournal of medical genetics2006

Lost in translation: translational interference from a recurrent mutation in exon 1 of MECP2.

A Saxena, D de Lagarde, H Leonard, S L Williamson, V Vasudevan, J Christodoulou, E Thompson, P MacLeod, D Ravine

Open access · greenAbstract readCase Reports
In one paragraph

Article in Journal of medical genetics, 2006. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Rett syndrome and MeCP2.Neuromolecular medicine · 2014
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
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  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

A SaxenaWestern Australian Institute for Medical Research, Centre for Medical Research, University of Western Australia, Level 2, North Block, Perth 6000, WA, Australia.
D de Lagarde
H Leonard
S L Williamson
V Vasudevan
J Christodoulou
E Thompson
P MacLeod
D Ravine
Harry Perkins Institute of Medical Research · AU

Funding

Rett syndrome: determinants of outcome and burdenR01HD043100 · NICHD · UNIVERSITY OF WESTERN AUSTRALIA · PI LEONARD, HELEN M · 2003 to 2007
$838k
NICHD NIH HHS 1 R01 HD43100-01A1NICHD NIH HHS R01 HD043100
6 · The paper itself

Abstract

backgroundRett syndrome (RTT) is an X linked neuro-developmental disorder affecting mostly girls. Mutations in the coding region of MECP2 are found in 80% of classic RTT patients. Until recently, the region encoding MECP2 was believed to comprise exons 2, 3, and 4 with the ATG start site located at the end of exon 2 (MeCP2_e2).

methodsRecent reports of another mRNA transcript transcribed from exon 1 (MeCP2_e1) prompted us to screen exon 1 among RNA samples from 20 females with classic or atypical RTT.

resultsA previously reported 11 base pair deletion in exon 1 was detected in one subject with a milder phenotype. Although RNA expression for both protein isoforms was detected from the mutant allele, evaluation of MeCP2 protein in uncultured patient lymphocytes by immunocytochemistry revealed that MeCP2 protein production was restricted to only 74-76% of lymphocytes. X chromosome inactivation studies of genomic DNA revealed similar XCI ratios at the HUMARA locus (73:27 with HpaII and 74:26 with McrBC). We have demonstrated that translation but not transcription of the MeCP2_e2 isoform is ablated by the 11 nucleotide deletion, 103 nucleotides upstream of the e2 translation start site.

conclusionsThese findings reveal that nucleotides within the deleted sequence in the 5'-UTR of the MeCP2_e2 transcript, while not required for transcription, are essential for translation.

Indexed as

ExonsAdolescentAdultAllelesBase SequenceChild, PreschoolFemaleHumansInfantLymphocytesMethyl-CpG-Binding Protein 2PhenotypeProtein BiosynthesisProtein IsoformsRett SyndromeRNA, MessengerMECP2 protein, humanMethyl-CpG-Binding Protein 2Protein IsoformsRNA, Messenger

Identifiers

PMID16155192
PMCPMC2593027
OpenAlexW2090815083

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.