Evidence map›Paper›PMID 16155184›Full record

ArticleNucleic acids research2005

RNase P: role of distinct protein cofactors in tRNA substrate recognition and RNA-based catalysis.

Ela Sharin, Aleks Schein, Hagit Mann, Yitzhak Ben-Asouli, Nayef Jarrous

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. The Dynamic Network of RNP RNase P Subunits.International journal of molecular sciences · 2021
    Review
  6. Riboswitches and the RNA world.Cold Spring Harbor perspectives in biology · 2012
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Ribonuclease P: the evolution of an ancient RNA enzyme.Critical reviews in biochemistry and molecular biology
    Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ela SharinDepartment of Molecular Biology, The Hebrew University-Hadassah Medical School, Jerusalem 91120, Israel.
Aleks Schein
Hagit Mann
Yitzhak Ben-Asouli
Nayef Jarrous
Hebrew University of Jerusalem · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Escherichia coli ribonuclease P (RNase P) has a protein component, termed C5, which acts as a cofactor for the catalytic M1 RNA subunit that processes the 5' leader sequence of precursor tRNA. Rpp29, a conserved protein subunit of human RNase P, can substitute for C5 protein in reconstitution assays of M1 RNA activity. To better understand the role of the former protein, we compare the mode of action of Rpp29 to that of the C5 protein in activation of M1 RNA. Enzyme kinetic analyses reveal that complexes of M1 RNA-Rpp29 and M1 RNA-C5 exhibit comparable binding affinities to precursor tRNA but different catalytic efficiencies. High concentrations of substrate impede the activity of the former complex. Rpp29 itself exhibits high affinity in substrate binding, which seems to reduce the catalytic efficiency of the reconstituted ribonucleoprotein. Rpp29 has a conserved C-terminal domain with an Sm-like fold that mediates interaction with M1 RNA and precursor tRNA and can activate M1 RNA. The results suggest that distinct protein folds in two unrelated protein cofactors can facilitate transition from RNA- to ribonucleoprotein-based catalysis by RNase P.

Indexed as

5' Untranslated RegionsAmino Acid SequenceCatalysisConserved SequenceEscherichia coli ProteinsHumansKineticsMolecular Sequence DataMutationProtein Structure, TertiaryRibonuclease PRibonucleasesRibonucleoproteinsRNA PrecursorsRNA, TransferSubstrate Specificity5' Untranslated RegionsEscherichia coli ProteinsPOP4 protein, humanRibonuclease Pribonuclease P, E coliRibonucleasesRibonucleoproteinsRNA PrecursorsRNA, Transfer

Identifiers

PMID16155184
PMCPMC1201335
OpenAlexW2110719944

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.