Evidence map›Paper›PMID 16155006›Full record

ArticleThe Journal of biological chemistry2005

HuR stabilizes vacuolar H+-translocating ATPase mRNA during cellular energy depletion.

Selvi Jeyaraj, Duaa Dakhlallah, Stephanie R Hill, Beth S Lee

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 30 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Vacuolar ATPase in phagosome-lysosome fusion.The Journal of biological chemistry · 2015
    Article
  5. Krüppel -like factor 8 is a stress-responsive transcription factor that regulates expression of HuR.Cellular physiology and biochemistry : international journal of experimental cellular physiology, biochemistry, and pharmacology · 2014
    Article
  6. Review
  7. Article
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Selvi JeyarajDepartment of Physiology and Cell Biology, College of Medicine, The Ohio State University, Columbus, 43210, USA.
Duaa Dakhlallah
Stephanie R Hill
Beth S Lee
The Ohio State University · US

Funding

TRANSCRIPTIONAL CONTROL OF VACUOLAR H+-ATPASE EXPRESSIONR01DK052131 · NIDDK · WASHINGTON UNIVERSITY · PI LEE, BETH S. · 1997 to 2009
$2.7M
NIDDK NIH HHS DK52131NIDDK NIH HHS R01 DK052131NIDDK NIH HHS R01 DK052131-07A1NIDDK NIH HHS R01 DK052131-08NIDDK NIH HHS R01 DK052131-09NIDDK NIH HHS R01 DK052131-10
6 · The paper itself

Abstract

V-ATPases are multisubunit membrane proteins that use ATP binding and hydrolysis to transport protons across membranes against a concentration gradient. Although some cell types express plasma membrane forms of these transporters, all eukaryotes require V-ATPases to maintain an acidic pH in membrane-bound compartments of endocytic and secretory networks to facilitate protein trafficking and processing. Mammalian cells that completely lack V-ATPases are not viable; yet, the abundance of V-ATPases can differ among cell types by an order of magnitude or more, requiring precise control of their expression. We previously showed that mRNA stability appears to play a major role in regulating overall abundance of V-ATPases. In this report, we demonstrate that the stability of V-ATPase mRNA is regulated through AU-rich elements in 3'-untranslated regions. Unlike some mRNAs that are short-lived due to the presence of these elements, V-ATPase mRNAs have half-lives of hours to days. However, during stress induced by ATP depletion, AU-rich elements are necessary to maintain stability of these transcripts and their presence in the cytoplasm. HuR, an RNA-binding protein that interacts with and stabilizes AU-rich mRNAs, shows increased binding to some V-ATPase mRNAs during ATP depletion. siRNA-mediated knockdown of HuR results in diminished V-ATPase expression. These results indicate that AU-rich elements and associated proteins can play a role in regulation of even very stable mRNAs by protecting against loss during cellular stress.

Indexed as

Adenosine TriphosphateAmino Acid SequenceAnimalsAntigens, SurfaceAT Rich SequenceCell LineELAV-Like Protein 1ELAV ProteinsEnergy MetabolismHumansRNA-Binding ProteinsRNA InterferenceRNA, MessengerRNA, Small InterferingRNA StabilityVacuolar Proton-Translocating ATPasesAdenosine TriphosphateAntigens, SurfaceATP6V1E2 protein, humanELAVL1 protein, humanELAV-Like Protein 1ELAV ProteinsRNA-Binding ProteinsRNA, MessengerRNA, Small InterferingVacuolar Proton-Translocating ATPases

Identifiers

PMID16155006
PMCPMC1351387
OpenAlexW2052936234

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.