Evidence map›Paper›PMID 16151515›Full record

ArticlePLoS genetics2005

Differential expression of novel potential regulators in hematopoietic stem cells.

E Camilla Forsberg, Susan S Prohaska, Sol Katzman, Garrett C Heffner, Josh M Stuart, Irving L Weissman

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 153 papers.

0numbers the graph read from it
0cells of the map it votes in
153citing papers in PubMed
9.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

153 citing papers in PubMed, 283 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Review
  6. Junctional adhesion molecule-C: A multifunctional mediator of cell adhesion.Cellular and molecular life sciences : CMLS · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Syndecans in hematopoietic cells and their niches.American journal of physiology. Cell physiology · 2024
    Review
  11. Review
  12. Article
  13. Article
  14. Gender-Specific Differences in Human Vertebral Bone Marrow Clot.International journal of molecular sciences · 2023
    Article
  15. Article
  16. Hematopoietic Stem Cell Identification Postirradiation.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  17. Review
  18. Hematopoietic stem cells and betaherpesvirus latency.Frontiers in cellular and infection microbiology · 2023
    Review
  19. Article
  20. Article

93 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

E Camilla ForsbergDepartment of Pathology, Institute of Cancer and Stem Cell Biology and Medicine, Stanford University Medical School, Stanford, California, USA. cforsber@stanford.edu
Susan S Prohaska
Sol Katzman
Garrett C Heffner
Josh M Stuart
Irving L Weissman
Stanford University · USUniversity of California, Santa Cruz · US

Funding

MOLECULAR &CELLULAR IMMUNOBIOLOGYT32AI007290 · NIAID · STANFORD UNIVERSITY · PI Sean Curtis Bendall, Olivia M Martinez · 1985 to 2026
$27.0M
STEM CELL DETRMINATION GENES IN HSC AND HEMATOLYMPHOID CELLS IN MICEP01DK053074 · NIDDK · STANFORD UNIVERSITY · PI CLARKE, MICHAEL F · 1997 to 2007
$8.3M
HSC Diversity: Regulation by Clonal Selection vs Epigenetic InductionR01CA086065 · NCI · STANFORD UNIVERSITY · PI WEISSMAN, IRVING L. · 2000 to 2017
$6.9M
Combined Methods for Protein-Structure PredictionR01GM068570 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI KARPLUS, KEVIN · 2003 to 2007
$1.1M
NCI NIH HHS 2R01CA086065NCI NIH HHS R01 CA086065NIAID NIH HHS T32 AI007290NIDDK NIH HHS 5P01DK053074NIDDK NIH HHS P01 DK053074NIGMS NIH HHS 1R01GM068570-01NIGMS NIH HHS R01 GM068570
6 · The paper itself

Abstract

The hematopoietic system is an invaluable model both for understanding basic developmental biology and for developing clinically relevant cell therapies. Using highly purified cells and rigorous microarray analysis we have compared the expression pattern of three of the most primitive hematopoietic subpopulations in adult mouse bone marrow: long-term hematopoietic stem cells (HSC), short-term HSC, and multipotent progenitors. All three populations are capable of differentiating into a spectrum of mature blood cells, but differ in their self-renewal and proliferative capacity. We identified numerous novel potential regulators of HSC self-renewal and proliferation that were differentially expressed between these closely related cell populations. Many of the differentially expressed transcripts fit into pathways and protein complexes not previously identified in HSC, providing evidence for new HSC regulatory units. Extending these observations to the protein level, we demonstrate expression of several of the corresponding proteins, which provide novel surface markers for HSC. We discuss the implications of our findings for HSC biology. In particular, our data suggest that cell-cell and cell-matrix interactions are major regulators of long-term HSC, and that HSC themselves play important roles in regulating their immediate microenvironment.

Indexed as

Gene Expression RegulationAnimalsAntigens, CDBone Marrow CellsCell CommunicationCell DivisionDNA, ComplementaryHematopoietic Stem CellsHumansMiceReverse Transcriptase Polymerase Chain ReactionRNATranscription, GeneticAntigens, CDDNA, ComplementaryRNA

Identifiers

PMID16151515
PMCPMC1200425
OpenAlexW1964457403

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.