Evidence map›Paper›PMID 16148306›Full record

ReviewMicrobiology and molecular biology reviews : MMBR2005

Fate of heterotrophic microbes in pelagic habitats: focus on populations.

Jakob Pernthaler, Rudolf Amann

Abstract readReview
In one paragraph

Review in Microbiology and molecular biology reviews : MMBR, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. A guide to the natural history of freshwater lake bacteria.Microbiology and molecular biology reviews : MMBR · 2011
    Pooled it
  2. Article
  3. Article
  4. The Effect ofToxins · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Microplastics in a dam lake in Turkey: type, mesh size effect, and bacterial biofilm communities.Environmental science and pollution research international · 2020
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Tight Coupling ofFrontiers in microbiology · 2017
    Article
  17. Article
  18. Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jakob PernthalerLimnological Station, Institute of Plant Biology, Seestrasse 187, CH-8802 Kilchberg, Switzerland. pernthaler@limnol.unizh.ch
Rudolf Amann

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Major biogeochemical processes in the water columns of lakes and oceans are related to the activities of heterotrophic microbes, e.g., the mineralization of organic carbon from photosynthesis and allochthonous influx or its transport to the higher trophic levels. During the last 15 years, cultivation-independent molecular techniques have substantially contributed to our understanding of the diversity of the microbial communities in different aquatic systems. In parallel, the complexity of aquatic habitats at a microscale has inspired research on the ecophysiological properties of uncultured microorganisms that thrive in a continuum of dissolved to particulate organic matter. One possibility to link these two aspects is to adopt a"Gleasonian" perspective, i.e., to study aquatic microbial assemblages in situ at the population level rather than looking at microbial community structure, diversity, or function as a whole. This review compiles current knowledge about the role and fate of different populations of heterotrophic picoplankton in marine and inland waters. Specifically, we focus on a growing suite of techniques that link the analysis of bacterial identity with growth, morphology, and various physiological activities at the level of single cells. An overview is given of the potential and limitations of methodological approaches, and factors that might control the population sizes of different microbes in pelagic habitats are discussed.

Indexed as

Water MicrobiologyBacteriaGenetic VariationPlanktonRNA, Ribosomal, 16SRNA, Ribosomal, 16S

Identifiers

PMID16148306
PMCPMC1197807

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.