Evidence map›Paper›PMID 16145840›Full record

ArticleTransgenic research2005

Long-range chromosomal engineering is more efficient in vitro than in vivo.

Lisa E Olson, Jason Tien, Sarah South, Roger H Reeves

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Transgenic research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Generation and characterization of a novel Cyp2a(4/5)bgs-null mouse model.Drug metabolism and disposition: the biological fate of chemicals · 2013
    Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Lisa E OlsonDepartment of Physiology, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA.
Jason Tien
Sarah South
Roger H Reeves
Johns Hopkins Medicine · USJohns Hopkins University · US

Funding

GENOMIC APPROACHES TO ANEUPLOIDYR01HD038384 · NICHD · JOHNS HOPKINS UNIVERSITY · PI REEVES, ROGER H · 2000 to 2020
$11.0M
UTILIZATION OF TRANSGENICS IN THE STUDY OF DOWN SYNDROMEP01HD024605 · NICHD · JOHNS HOPKINS UNIVERSITY · PI REEVES, ROGER H · 1989 to 2004
$8.2M
NICHD NIH HHS HD24605NICHD NIH HHS HD38384
6 · The paper itself

Abstract

Cre/LoxP mediated chromosomal engineering in embryonic stem (ES) cells has a variety of applications, including the creation of model systems for studying aneuploidy. Targeted meiotic recombination (TAMERE) was proposed as a high efficiency in vivo alternative to effect Cre-mediated recombination, in which Cre recombinase under control of the Synaptonemal Complex 1 promoter is expressed during male meiosis in transgenic mice. TAMERE has been successfully used with LoxP sites up to 100 kb apart. We tested TAMERE for a chromosome engineering application in which LoxP sequences were integrated into sites 3.9 Mb apart on the same (cis) or opposite (trans) copies of mouse Chromosome 16 (MMU16). TAMERE was ineffective in generating either a deletion or a translocation in vivo. The TAMERE method may be of limited use for large genomic rearrangements. The desired translocation was achieved with an in vitro method that can be used in any ES cell line. Mice produced from the reciprocal duplication/deletion of MMU16 in a region homologous to human chromosome 21 provide models that are useful in studies of Down syndrome.

Indexed as

ChromosomesGenetic EngineeringAnimalsCell LineCrosses, GeneticCrossing Over, GeneticDisease Models, AnimalDNA-Binding ProteinsDown SyndromeExtracellular Matrix ProteinsGenes, ReporterHumansIntegrasesIn Vitro TechniquesMaleMiceCre recombinaseDNA-Binding ProteinsExtracellular Matrix ProteinsIntegrasesLox protein, mouseNuclear ProteinsProtein-Lysine 6-OxidaseSycp1 protein, mouse

Identifiers

PMID16145840
OpenAlexW2107681770

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.